Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0597000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:30109980:30113588:-1 gene:Os04g0597000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCAMP6 description:Similar to Secretory carrier membrane protein. (Os04t0597000-01);Similar to Secretory carrier membrane protein. (Os04t0597000-02)
Sequence	ATGCATCACGACCCCAACCCGTTCGACGAGGGCAACGCCGACGACAACCCCTTCTCCAAT GGGGGAGGTGGTGGTGGCGGCGGCGGCAGCAGGCAGCAGTACGGGTTCCGCCCCACGGAG CCCGCCGGCTTCGGCGCCGGCAGGGGGGACGCCACCGTCGATGTCCCGCTCGACACCATG GGCGACTCCAAGAGCAAGGCAAGGGAGCTCTCATCGTGGGAAACAGATCTGAAGCGGCGG GAGGCGGATATCAAAAGGAGGGAGGAAGCGCTGAGGAATGCTGGAGTGCCAATGGAGGAT AAGAACTGGCCACCATTCTTCCCGATCATTCACCATGACATTGCCAATGAGATACCGGCT AATTTGCAGAAATTGCAGTATCTCGCGTTCGCAAGCTGGCTTGGTATCGTGCTTTGCCTC TCATGGAACTTCATCGCTGTCATAGTCTGTTGGATCAAGGAGGGAGATTCGAAGCTGTTT TTCCTTGCCACTATCTATGCCTTGCTTGGAATTCCCCTCTCGTACTTGATATGGTATAGG CCTCTCTACCGTGCTATGAGGACTAACAGTGCGTTCAGTTTTGGATGGTTCTTTCTCTGT TACTTGATCCACATTGGCTTTTGCATTATTGCTGCCATTGCCCCGCCAATTGTGTTTCAT GGAAAATCATTAACGGGCATACTGGCTGCCATAGACACCTTTTCTGAGCATGTGATAATT GGGATCTTTTACTTTGTGGGGTTCGCGCTGTTTTGCTTGGAGACACTGCTGAGCATTGGA GTTCTTCAGAGAGTGTACATGTACTTCAGAGGGAACAAGTGA

Peptide Sequence

PEP ID	Os04t0597000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:30109980:30113588:-1 gene:Os04g0597000 transcript:Os04t0597000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCAMP6 description:Similar to Secretory carrier membrane protein. (Os04t0597000-01);Similar to Secretory carrier membrane protein. (Os04t0597000-02)
Sequence	MHHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGFGAGRGDATVDVPLDTM GDSKSKARELSSWETDLKRREADIKRREEALRNAGVPMEDKNWPPFFPIIHHDIANEIPA NLQKLQYLAFASWLGIVLCLSWNFIAVIVCWIKEGDSKLFFLATIYALLGIPLSYLIWYR PLYRAMRTNSAFSFGWFFLCYLIHIGFCIIAAIAPPIVFHGKSLTGILAAIDTFSEHVII GIFYFVGFALFCLETLLSIGVLQRVYMYFRGNK

Transcript Sequence

Transcript ID	Os04t0597000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30109980:30113588:-1 gene:Os04g0597000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCAMP6 description:Similar to Secretory carrier membrane protein. (Os04t0597000-01);Similar to Secretory carrier membrane protein. (Os04t0597000-02)
Sequence	ACCACTCGCCGCTTTACCCGCCGTTCTCCTCCTCCTCCTCCTCCACGCGCGGCGGCGAGG CGGAGCCAAGCCCTAGGAAGGAGCGGCGCGTCACCGGCGGCGGCGGCGGCATGCATCACG ACCCCAACCCGTTCGACGAGGGCAACGCCGACGACAACCCCTTCTCCAATGGGGGAGGTG GTGGTGGCGGCGGCGGCAGCAGGCAGCAGTACGGGTTCCGCCCCACGGAGCCCGCCGGCT TCGGCGCCGGCAGGGGGGACGCCACCGTCGATGTCCCGCTCGACACCATGGGCGACTCCA AGAGCAAGGCAAGGGAGCTCTCATCGTGGGAAACAGATCTGAAGCGGCGGGAGGCGGATA TCAAAAGGAGGGAGGAAGCGCTGAGGAATGCTGGAGTGCCAATGGAGGATAAGAACTGGC CACCATTCTTCCCGATCATTCACCATGACATTGCCAATGAGATACCGGCTAATTTGCAGA AATTGCAGTATCTCGCGTTCGCAAGCTGGCTTGGTATCGTGCTTTGCCTCTCATGGAACT TCATCGCTGTCATAGTCTGTTGGATCAAGGAGGGAGATTCGAAGCTGTTTTTCCTTGCCA CTATCTATGCCTTGCTTGGAATTCCCCTCTCGTACTTGATATGGTATAGGCCTCTCTACC GTGCTATGAGGACTAACAGTGCGTTCAGTTTTGGATGGTTCTTTCTCTGTTACTTGATCC ACATTGGCTTTTGCATTATTGCTGCCATTGCCCCGCCAATTGTGTTTCATGGAAAATCAT TAACGGGCATACTGGCTGCCATAGACACCTTTTCTGAGCATGTGATAATTGGGATCTTTT ACTTTGTGGGGTTCGCGCTGTTTTGCTTGGAGACACTGCTGAGCATTGGAGTTCTTCAGA GAGTGTACATGTACTTCAGAGGGAACAAGTGAAGCTATTCATCATGATGGAAAGTTTCCG GTGATCACCAGTAGCACACCTCTTCATGCATCGCTTCTGTGCATACAAATCAGTACACCC TGAGAATGTCTCTTCATGTCAGTTTATTGTGAAACCTTTTCAAGCTTGTTATGGGGTAGG TTGTTAGCATCGTTATCATAGCTTTGTGTCTGGAACGAGGTGTTTTGATTCTTGGCAAAC TGTAGTCCGTATGTGATTGGGTAGATCGCCGGTTTGCCTGTTGGTTACCGTTAAATGAGC TAAGGCTATTCTCGCTCGGGAAAATAGACACAAAATTGCATTCAGACCTGGATCATATAT ATGCACCCTTGCGGATTGTTGGCTTGATGCTGTGCTTCCCGATTTTTACTATCCATCTAA CTCAAAGCAGATTCATCTGGCACAATTCGTTGC