Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0594800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:30062428:30065569:1 gene:Os04g0594800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oligopeptide transporter 6 description:Similar to OSIGBa0142I02-OSIGBa0101B20.31 protein. (Os04t0594800-01)
Sequence	ATGGAGATTGAGCATCTCGGCGCCCGCGCGGCCGCCGCCGCCGGCGAGGATGACCAGTCG CCGGTGGAGCAGGTCCGGCTGACCGTGCCGACGACCGACGACCCGTCTCTGCCGGTATGG ACGTTCCGGATGTGGACCATCGGGCTCCTCTCCTGCGCCATGCTCTCCTACATCAACCAG TTCTTCTCCTACCGCTCTGAGCCCATCGTCATCACCCAGATCACTGTCCAGGTGGCGGCG CTGCCAATAGGGCACTTCTTGGCACGCGTGCTGCCGAAGAGGAAGTTCACGGTGTTCGGG CGGGAGTGCTCGCTGAACCCTGGGCCATTCAACGTGAAGGAGCACGTCCTGATATCCATC TTCGCCAACGCCGGCGCCGCGTTCGGCAACGGCGGCGCCTACGCCATCGACATCATCAAC ATCATCAAGGCGTTCTACCACCGCAGCATCTCCTTTCCCACCAGCCTCCTCCTCGTCATC ACCACCCAGGTGTTGGGCTACGGATGGGCAGGGCTGATGAGGAAGTACGTGGTGGAGCCG GCGCACATGTGGTGGCCGCAGAGTCTCGTGCAGGTTTCCCTCCTGAGGGCGTTGCACGAG AAGGAGAACCTGCGGATGACGCGGGCCAAGTTCTTCCTGATCGCGCTGATCTGCAGCGCG GCGTGGTACGTGGTGCCGGGCTACCTGTTCCCGACCGTGGGCGCGGTGTCGTGGCTGTGC TGGGCGTTCCCGAGGTCGGTGACGATGCAGCAGATCGGGTCCGGCATGAGCGGCCTCGGC GTCGGCGCCTTCACGCTCGACTGGGCCACCGTCGTCTCCTTCCTGGGCAGCCCGCTCGTG TACCCGTTCTTCGCCATCGTCAACGTCTGGGTCGGCTTCGTGCTCCTCGTCTACGTCATG CTGCCCATCGCCTACTGGGTGCTCAACCTGTACCAGGCCAGCACGTTCCCCTTTTTCTCC GCGAGCCTGTTCGACCACACCGGCGAGGAGTACAGGATCTCGGAGATCGTCAACGACAGG TTCGAGCTCGACACGGACGCCTACGCGCGGCAGGGGAAGATCCACCTCAGCCTCTTCTTC GCCACCTCCTACGGCCTCGGCTTCGCCACCATCGCCGCCACCCTGTCCCACGTCACGCTC TTCTATGGAACGGAGATGTATCGCAGGTTCCGGCAGGCGGCCAGGGAGAACCCGGACGTG CACACGAGGCTGATGAGGAGGTACGATGACATCCCCAACTGGTGGTTCTACGGCATGCTC GCGTTGGCCATGGTGGCGGCGCTGTTGCTCTGCACCGTGTTCAAGGACGAGGTGCAGCTG CCGTGGTGGGCGCTACTCTGCGCCGTGGCCGTGGCCGCCTTCTTCACGCTCCCCATCAGT GTTATCACCGCCACCACAAACACGACCCCAGGGTTGAACATCATCACGGAGTATGTGATG GGGCTGATCATGCCGGGGAAGCCGATAGCCAACGTGTGCTTCAAGGTGTATGGTTACATC AGCATGAACCAGGCCGTCTCCTTCCTCACTGACTTCAAACTCGGCCACTACATGAAGATT CCTCCAAGATCCATGTTTCTAGTCCAGTTCATCGGGACGATCGTGGCGGGGACGGTGAAC ATGTCGGTGGCGTGGTGGCTGCTGTCGACGGTGCCGCACATCTGCGACAAGAAGCACCTC CCGGAGGGGAGCCCGTGGACGTGCCCGGGCTCCCGCGTGTTCTTCGACGCGTCGGTGATC TGGGGACTGGTCGGGCCTCGCCGGATCTTCGGCCCGCTCGGCTACTACGGCGCGCTCAAC TGGTTCTTCCTCGGCGGGCTGGCAGGGCCGGCGGTGGTGTGGCTGCTGGCGAGGGCGCTG CCGCGGCACGCCGGCTGGATCAGGCTCATCCACCTCCCCGTGCTCCTCGGCGCCACCGCC AACATGCCGCCGGCGTCGACGCTCAACTACACGGCGTGGTGCTCCGTCGGCGCCGTGTTC AACTACCTGGTGTTCCGCCGCCGCAAGGCGTGGTGGCAGCGGTACAACTACGTGCTGTCG GCGGCGATGGACGCCGGCGTGGCCATCATGGGCGTGCTCATCTACTTCTGCCTGTCCAGC CGCGGCATCACCCCAGACTGGTGGGGCAACAGCGACATCAACATCGACCACTGCGACCTC TCCACCTGCCCCACCGCCAAGGGCGTCATTGTGGAGGGATGTCCCGTCTTCTGA

Peptide Sequence

PEP ID	Os04t0594800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:30062428:30065569:1 gene:Os04g0594800 transcript:Os04t0594800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oligopeptide transporter 6 description:Similar to OSIGBa0142I02-OSIGBa0101B20.31 protein. (Os04t0594800-01)
Sequence	MEIEHLGARAAAAAGEDDQSPVEQVRLTVPTTDDPSLPVWTFRMWTIGLLSCAMLSYINQ FFSYRSEPIVITQITVQVAALPIGHFLARVLPKRKFTVFGRECSLNPGPFNVKEHVLISI FANAGAAFGNGGAYAIDIINIIKAFYHRSISFPTSLLLVITTQVLGYGWAGLMRKYVVEP AHMWWPQSLVQVSLLRALHEKENLRMTRAKFFLIALICSAAWYVVPGYLFPTVGAVSWLC WAFPRSVTMQQIGSGMSGLGVGAFTLDWATVVSFLGSPLVYPFFAIVNVWVGFVLLVYVM LPIAYWVLNLYQASTFPFFSASLFDHTGEEYRISEIVNDRFELDTDAYARQGKIHLSLFF ATSYGLGFATIAATLSHVTLFYGTEMYRRFRQAARENPDVHTRLMRRYDDIPNWWFYGML ALAMVAALLLCTVFKDEVQLPWWALLCAVAVAAFFTLPISVITATTNTTPGLNIITEYVM GLIMPGKPIANVCFKVYGYISMNQAVSFLTDFKLGHYMKIPPRSMFLVQFIGTIVAGTVN MSVAWWLLSTVPHICDKKHLPEGSPWTCPGSRVFFDASVIWGLVGPRRIFGPLGYYGALN WFFLGGLAGPAVVWLLARALPRHAGWIRLIHLPVLLGATANMPPASTLNYTAWCSVGAVF NYLVFRRRKAWWQRYNYVLSAAMDAGVAIMGVLIYFCLSSRGITPDWWGNSDINIDHCDL STCPTAKGVIVEGCPVF

Transcript Sequence

Transcript ID	Os04t0594800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30062428:30065569:1 gene:Os04g0594800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oligopeptide transporter 6 description:Similar to OSIGBa0142I02-OSIGBa0101B20.31 protein. (Os04t0594800-01)
Sequence	TGCCAGCAATTCCGTCACTTTGACAGATTATTCTGAAGCGCGAGGTTTTGCAGGCGCCTC CTCGCGCGGGGTAGCAATGGAGATTGAGCATCTCGGCGCCCGCGCGGCCGCCGCCGCCGG CGAGGATGACCAGTCGCCGGTGGAGCAGGTCCGGCTGACCGTGCCGACGACCGACGACCC GTCTCTGCCGGTATGGACGTTCCGGATGTGGACCATCGGGCTCCTCTCCTGCGCCATGCT CTCCTACATCAACCAGTTCTTCTCCTACCGCTCTGAGCCCATCGTCATCACCCAGATCAC TGTCCAGGTGGCGGCGCTGCCAATAGGGCACTTCTTGGCACGCGTGCTGCCGAAGAGGAA GTTCACGGTGTTCGGGCGGGAGTGCTCGCTGAACCCTGGGCCATTCAACGTGAAGGAGCA CGTCCTGATATCCATCTTCGCCAACGCCGGCGCCGCGTTCGGCAACGGCGGCGCCTACGC CATCGACATCATCAACATCATCAAGGCGTTCTACCACCGCAGCATCTCCTTTCCCACCAG CCTCCTCCTCGTCATCACCACCCAGGTGTTGGGCTACGGATGGGCAGGGCTGATGAGGAA GTACGTGGTGGAGCCGGCGCACATGTGGTGGCCGCAGAGTCTCGTGCAGGTTTCCCTCCT GAGGGCGTTGCACGAGAAGGAGAACCTGCGGATGACGCGGGCCAAGTTCTTCCTGATCGC GCTGATCTGCAGCGCGGCGTGGTACGTGGTGCCGGGCTACCTGTTCCCGACCGTGGGCGC GGTGTCGTGGCTGTGCTGGGCGTTCCCGAGGTCGGTGACGATGCAGCAGATCGGGTCCGG CATGAGCGGCCTCGGCGTCGGCGCCTTCACGCTCGACTGGGCCACCGTCGTCTCCTTCCT GGGCAGCCCGCTCGTGTACCCGTTCTTCGCCATCGTCAACGTCTGGGTCGGCTTCGTGCT CCTCGTCTACGTCATGCTGCCCATCGCCTACTGGGTGCTCAACCTGTACCAGGCCAGCAC GTTCCCCTTTTTCTCCGCGAGCCTGTTCGACCACACCGGCGAGGAGTACAGGATCTCGGA GATCGTCAACGACAGGTTCGAGCTCGACACGGACGCCTACGCGCGGCAGGGGAAGATCCA CCTCAGCCTCTTCTTCGCCACCTCCTACGGCCTCGGCTTCGCCACCATCGCCGCCACCCT GTCCCACGTCACGCTCTTCTATGGAACGGAGATGTATCGCAGGTTCCGGCAGGCGGCCAG GGAGAACCCGGACGTGCACACGAGGCTGATGAGGAGGTACGATGACATCCCCAACTGGTG GTTCTACGGCATGCTCGCGTTGGCCATGGTGGCGGCGCTGTTGCTCTGCACCGTGTTCAA GGACGAGGTGCAGCTGCCGTGGTGGGCGCTACTCTGCGCCGTGGCCGTGGCCGCCTTCTT CACGCTCCCCATCAGTGTTATCACCGCCACCACAAACACGACCCCAGGGTTGAACATCAT CACGGAGTATGTGATGGGGCTGATCATGCCGGGGAAGCCGATAGCCAACGTGTGCTTCAA GGTGTATGGTTACATCAGCATGAACCAGGCCGTCTCCTTCCTCACTGACTTCAAACTCGG CCACTACATGAAGATTCCTCCAAGATCCATGTTTCTAGTCCAGTTCATCGGGACGATCGT GGCGGGGACGGTGAACATGTCGGTGGCGTGGTGGCTGCTGTCGACGGTGCCGCACATCTG CGACAAGAAGCACCTCCCGGAGGGGAGCCCGTGGACGTGCCCGGGCTCCCGCGTGTTCTT CGACGCGTCGGTGATCTGGGGACTGGTCGGGCCTCGCCGGATCTTCGGCCCGCTCGGCTA CTACGGCGCGCTCAACTGGTTCTTCCTCGGCGGGCTGGCAGGGCCGGCGGTGGTGTGGCT GCTGGCGAGGGCGCTGCCGCGGCACGCCGGCTGGATCAGGCTCATCCACCTCCCCGTGCT CCTCGGCGCCACCGCCAACATGCCGCCGGCGTCGACGCTCAACTACACGGCGTGGTGCTC CGTCGGCGCCGTGTTCAACTACCTGGTGTTCCGCCGCCGCAAGGCGTGGTGGCAGCGGTA CAACTACGTGCTGTCGGCGGCGATGGACGCCGGCGTGGCCATCATGGGCGTGCTCATCTA CTTCTGCCTGTCCAGCCGCGGCATCACCCCAGACTGGTGGGGCAACAGCGACATCAACAT CGACCACTGCGACCTCTCCACCTGCCCCACCGCCAAGGGCGTCATTGTGGAGGGATGTCC CGTCTTCTGATCGATCATCCATCCAATATACATATTTCCCCCGTAGATGTGTTCTTCGTG CGAAACTAGATCAGTAAAATCAATCAGAATCTGAATCTCTACTCGTTTAATATGGCAGGA CTGATGCTGTTCTTATTTAAAGTTGTATATATCATTTGGGTTTTTAGGTTTCCAAATGCT CTTCTTTTTCGTGTTTTAACCAAGTTCAGTGAGCTCAGTTACCCAGTTAGTATATTATAG AATTGGTTTCGCTCCAATGGAGTTTTATTGCTGTGTTTTAATTGAGTTCAATGAGATATA TATTGGTTAAGTCC