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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0593500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:30004294:30005122:1 gene:Os04g0593500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.21 protein. (Os04t0593500-00)
Sequence

ATGAAAGGGAGCGTCTGCCACGAGCTGGAGACTGGGCTCCCCGCTGCCGAGGTGTGGGAG
GTCTATGGCGGCTTCCTTGTTGCGCAGCTGCTCCCTCAGCTGGTTCCTGAAGTATTTTCC
AAGGTTGAGCTCGTTGAGGGAGACGGTGGCGTTGGGTCTGTCCTGCATGTCGTCTTCGCT
CCTGGGGCACATAGGGGAGAATTCATGAAAGAAAAGTTCATCAAGATTGACAATGAGAAC
TACATCAAGGAGGCAGAAGTAATAGAAGGTGGTTTTCTAGATCAAGGCTTTAAGAAATAT
GTCGTGCGAATAGAGATCATCGGAAAAACAGAAAACTCTTCTGTACTACGATCGACCATT
AAATTCGAAGCTGAGGACGCAAGCAAGGCATCCTCTGTCAGCACCGGTGGTTTAGCTGCT
ACTGCTGAGGCCGTCACGAAGTATATGAGGGAACAGAGGAGCAGCGCCGAGCCTGAACAG
GTTCCAAGGCAGACTTCAGATGAAGAGACCTTCTAG

Peptide Sequence

PEP ID

Os04t0593500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:30004294:30005122:1 gene:Os04g0593500 transcript:Os04t0593500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.21 protein. (Os04t0593500-00)
Sequence

MKGSVCHELETGLPAAEVWEVYGGFLVAQLLPQLVPEVFSKVELVEGDGGVGSVLHVVFA
PGAHRGEFMKEKFIKIDNENYIKEAEVIEGGFLDQGFKKYVVRIEIIGKTENSSVLRSTI
KFEAEDASKASSVSTGGLAATAEAVTKYMREQRSSAEPEQVPRQTSDEETF

Transcript Sequence

Transcript ID

Os04t0593500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30004294:30005122:1 gene:Os04g0593500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.21 protein. (Os04t0593500-00)
Sequence

AGCACAGGAGGCGATGAAAGGGAGCGTCTGCCACGAGCTGGAGACTGGGCTCCCCGCTGC
CGAGGTGTGGGAGGTCTATGGCGGCTTCCTTGTTGCGCAGCTGCTCCCTCAGCTGGTTCC
TGAAGTATTTTCCAAGGTTGAGCTCGTTGAGGGAGACGGTGGCGTTGGGTCTGTCCTGCA
TGTCGTCTTCGCTCCTGGGGCACATAGGGGAGAATTCATGAAAGAAAAGTTCATCAAGAT
TGACAATGAGAACTACATCAAGGAGGCAGAAGTAATAGAAGGTGGTTTTCTAGATCAAGG
CTTTAAGAAATATGTCGTGCGAATAGAGATCATCGGAAAAACAGAAAACTCTTCTGTACT
ACGATCGACCATTAAATTCGAAGCTGAGGACGCAAGCAAGGCATCCTCTGTCAGCACCGG
TGGTTTAGCTGCTACTGCTGAGGCCGTCACGAAGTATATGAGGGAACAGAGGAGCAGCGC
CGAGCCTGAACAGGTTCCAAGGCAGACTTCAGATGAAGAGACCTTCTAG