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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0593400-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:30001534:30002419:1 gene:Os04g0593400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.20 protein. (Os04t0593400-00)
Sequence

ATGAGAGGAAGCCAGAGCCACGAGCTGGAGACCGACGTCCCGGCGTCCGAGCTGTGGAAG
ATCTACGGCACGCTCCGCGCCGCCGAGCTGCTGCCCGAGCTGCTCCCCCACATCCTCGCC
AAGGTCGAGCTCGTCACCGGCGACGGCGGCGTCGGCACCATCGTGCGACTGACTTTTCCT
CCAGGAATTCCTGGATTGCAGAGCTACAAGGAGAAATTCATCAAAGTTGACAACAAGAAT
TACGTTAAGGAGGCAGAGGCGGTGGAAGGCGACATCCTGAAGCTGGGCTTCCTCTCGTAC
ATGATCCGGTTCGAGATCATTCGGAAAGGGGCCAACACTTCGGTTATAAGATCGACTATC
GAGTATGAGATCGGTGATGAGCATCCAGAGCTCCAAGCCATGGTTAGTACCGCATCATTG
GCTGCGACCGCTGAAAAATTTGCAGAGTATATCAAGACGCAGAAAGTAGCTCAGGCCAAC
ACCTGA

Peptide Sequence

PEP ID

Os04t0593400-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:30001534:30002419:1 gene:Os04g0593400 transcript:Os04t0593400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.20 protein. (Os04t0593400-00)
Sequence

MRGSQSHELETDVPASELWKIYGTLRAAELLPELLPHILAKVELVTGDGGVGTIVRLTFP
PGIPGLQSYKEKFIKVDNKNYVKEAEAVEGDILKLGFLSYMIRFEIIRKGANTSVIRSTI
EYEIGDEHPELQAMVSTASLAATAEKFAEYIKTQKVAQANT

Transcript Sequence

Transcript ID

Os04t0593400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30001534:30002419:1 gene:Os04g0593400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.20 protein. (Os04t0593400-00)
Sequence

ATGAGAGGAAGCCAGAGCCACGAGCTGGAGACCGACGTCCCGGCGTCCGAGCTGTGGAAG
ATCTACGGCACGCTCCGCGCCGCCGAGCTGCTGCCCGAGCTGCTCCCCCACATCCTCGCC
AAGGTCGAGCTCGTCACCGGCGACGGCGGCGTCGGCACCATCGTGCGACTGACTTTTCCT
CCAGGAATTCCTGGATTGCAGAGCTACAAGGAGAAATTCATCAAAGTTGACAACAAGAAT
TACGTTAAGGAGGCAGAGGCGGTGGAAGGCGACATCCTGAAGCTGGGCTTCCTCTCGTAC
ATGATCCGGTTCGAGATCATTCGGAAAGGGGCCAACACTTCGGTTATAAGATCGACTATC
GAGTATGAGATCGGTGATGAGCATCCAGAGCTCCAAGCCATGGTTAGTACCGCATCATTG
GCTGCGACCGCTGAAAAATTTGCAGAGTATATCAAGACGCAGAAAGTAGCTCAGGCCAAC
ACCTGA