Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0592700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29981606:29988159:-1 gene:Os04g0592700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-108 description:WD40 repeat-like domain containing protein. (Os04t0592700-01)
Sequence	ATGGCTTCGTCGCAGGGCCTCAAGAAGAACTACCGCTGCGACCGCTCGCTGCAGCAGTTC TACACGGGCGGGCCGTTCGCCGTCGGGAGCTCTCCCGGAGGCGGCGAAGGCGAAGTCGAA GGAGGCGAGGCCGAGGCCGAGGCGTTCCTCGCGTGCGCCTGCGGCGGGGAGGTGCGCCTG GTGTCCGCCGCCGACGCGTCCGCCATCGGGGAGCCGATCGAGGGCGAAAACGAGGCCGTC ACGGCGCTCGCGCTGTCCCCCGACTCCCGCCTCCTCTTCACCGCGGGGCACAGTAGGCTT ATTCGAGTCTGGGACCTCGCGTCCCGCACTTGCACACGCAGCTGGAAGGGGCACGATGGT CCTATTAGGGCCATGGCCTGCCATGCTTCTGGTGGGTTGCTTGCAACTGCTGGAGCAGAC AAAAAGGTGTGCGTTTGGGATGTTGATGGTGGGTTTTGCACACATTTCTTTAGAGGCCAC GCAGGTGTTGTGACGACTGTTATGTTCCACAAAGATCCGAAGCGCCTTCTGCTATTTTCT GGAAGTGAAGATGCCACTGTGAGAGTTTGGAACCTTGAAAGCAAAAAGTGTGTCGCTGTG CTGAAAGAGCATTTTTCAGCTGTGACATCATTAGCCTTATCTGAAGATGGACAAACATTG CTTAGTGCTGGGCGGGATAAGATTGTGAATGTGTGGGATGTTCGTAAGTACAACTCAAAG AAGACAATACCAGCATTTGAAATGATAGAAGATGTTTCCTTCATTGGACCAGGAAGTAAT TTATTGTCTTGTTTGGGTGAACCGGCAAATATAAAACGCAAAACAGATGGTTATTTTCTT ACGGTTGGTGAACGTGGAGTAGTTCGCATCTGGTGCTTGGAAAGTGCTCAGTGTATATAT GAGCAGCAATCATCCGATGTAACCGTTAACACAGAGAATGAGGAGTCTAGAAGGGGTTTT ACTTCTGCTGTTATGTTGTCAGATGATCAAGGACTGCTATGTGCCACTGCCGATCAGCAG TTTTTGTTCTACTGTCCCACGAGAACTGACGGAGGGGACTTCCAGCTGAACTTATATAAA CGCCTAGTAGGTTATAATGATGAGATTCTTGATTTGAAGTTTGTTGGGGAGGATGAACAA TATCTTGCTGTAGCTACTAACTTGGAGCAGGTCCGTGTTTATGACGTTGCATCGATGTCA TGTTCTTATGTGCTGTCTGGCCACACTGAAATTGTTGTTTGCATCGACACTTGTATTTCT TCTTCTGGGAAGACACTTGTTGTGACTGGGAGCAAAGATAGCACTGTGAGACTCTGGGAT ATGGAAAGGAGAAGCTGCATTGGTATTGGTAAAGGTCATCTGGGAGCTATTGGTTCCGTT GCATTCTCAAAGAAATCTAAGAATTTTTTTGTTAGTGGAAGCAGTGATCGGACCATCAAG ATATGGAGCTGGGATGATACACTTGATGATGTTGGCAGTGAAGTTCCTCTCAAAGCAAAA GCTGTTGTAGCTGCACATGACAAAGATATTAATTCTCTTTCTGTCTCGCCTAATGACGGT CTTGTTTGCAGTGGTTCTGAGGACCGTACTGCATGCATATGGAAACTTCCAAACTTAGTG CCCTCTGTTGTCCTTAAAGGGCATAAAAGGGGCATTTGGTCAGTCGAGTTTTCTCCTGTG GAGCAGTGTGTCATTACATCATCTGGTGACAGAACAGTCAAAATATGGGCTGTTGCTGAT GGTTCATGCTTGAAGACATTTGAGGGCCATACATCTAGTGTTTTACGAGCCTCATTCCTT TCACACGGGACCCAATTTGTTTCTTGTGGAAGCGATGGCCTTGTTAAGCTATGGACCATC AAAACAAATGAATGCATTGCTACTTTCGATAAGCATGATGGGAAGGTTTGGGCACTGGCT GTTGGCAAGAAAACTGAAATGCTTGCTACTGGCGGAACTGATGCTGTTCTTAACCTTTGG CATGACTGTACCATGGAAGATAAACAGGAAGATTTTCGTAAAAAGGAGGAGGAACTGTTG AGAGGTCAGGAATTAGAAAATGCAGTATCAGATTATGACTATGCAAAAGCAATACAACTT GCATTTGAGCTTAGAAGACCCCACAGGCTTCTTGAGTTATTCACACAGCTTTGCAGGGAG TCTGATCTGGAGGACCCAATAGAAAAAGCCCTTATTGGTCTTCCAAAGGAAGGGCTTCGC GTACTTCTTGAGTATATCCGGGAATGGAACACAAAACCTAAGCTTTGTCATGTTGCACAG TTTGTGCTTTTTCGGGTATTGAGGAGCTTGCCTCCCACTGATATCCTGGAGATAAAGGGC ATCAGTGAGCTCCTTGAGGGACTTATTCCATATTCACAGAGGCATTTCAGCAGAGTTGAT AGACTAGTACGAAGCACATTTTTATTGGATTACACCTTGACCCGGATGTCTGTTGTAGAT CCGGACATAGATGAGGGCACAACCAGAGATGACGCAAATGGCTCATCAGTAGAGAATTGT GAAATTGCACAGGCGAAGCCTGATGCATTGGTAGCAGAAGAGAACTTGCAAAAGTCGGTA AAGAAAAGAAAATCAAGCAAATCAAGCAAAAAAGGCGGTAAGAAGGTGAAGATTGCGTCC ACGGGGGGCAGTAAGGATGTTCCTATTGAGGCTTAA

Peptide Sequence

PEP ID	Os04t0592700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29981606:29988159:-1 gene:Os04g0592700 transcript:Os04t0592700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-108 description:WD40 repeat-like domain containing protein. (Os04t0592700-01)
Sequence	MASSQGLKKNYRCDRSLQQFYTGGPFAVGSSPGGGEGEVEGGEAEAEAFLACACGGEVRL VSAADASAIGEPIEGENEAVTALALSPDSRLLFTAGHSRLIRVWDLASRTCTRSWKGHDG PIRAMACHASGGLLATAGADKKVCVWDVDGGFCTHFFRGHAGVVTTVMFHKDPKRLLLFS GSEDATVRVWNLESKKCVAVLKEHFSAVTSLALSEDGQTLLSAGRDKIVNVWDVRKYNSK KTIPAFEMIEDVSFIGPGSNLLSCLGEPANIKRKTDGYFLTVGERGVVRIWCLESAQCIY EQQSSDVTVNTENEESRRGFTSAVMLSDDQGLLCATADQQFLFYCPTRTDGGDFQLNLYK RLVGYNDEILDLKFVGEDEQYLAVATNLEQVRVYDVASMSCSYVLSGHTEIVVCIDTCIS SSGKTLVVTGSKDSTVRLWDMERRSCIGIGKGHLGAIGSVAFSKKSKNFFVSGSSDRTIK IWSWDDTLDDVGSEVPLKAKAVVAAHDKDINSLSVSPNDGLVCSGSEDRTACIWKLPNLV PSVVLKGHKRGIWSVEFSPVEQCVITSSGDRTVKIWAVADGSCLKTFEGHTSSVLRASFL SHGTQFVSCGSDGLVKLWTIKTNECIATFDKHDGKVWALAVGKKTEMLATGGTDAVLNLW HDCTMEDKQEDFRKKEEELLRGQELENAVSDYDYAKAIQLAFELRRPHRLLELFTQLCRE SDLEDPIEKALIGLPKEGLRVLLEYIREWNTKPKLCHVAQFVLFRVLRSLPPTDILEIKG ISELLEGLIPYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDIDEGTTRDDANGSSVENC EIAQAKPDALVAEENLQKSVKKRKSSKSSKKGGKKVKIASTGGSKDVPIEA

Transcript Sequence

Transcript ID	Os04t0592700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29981606:29988159:-1 gene:Os04g0592700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-108 description:WD40 repeat-like domain containing protein. (Os04t0592700-01)
Sequence	CCTCTGTCTCGCGCCGCCGCCGCCGCCGCAGCAAAACCCTAGCCTCCGCCGCCGTCGTTC CCTCCCGCCGCCTCGCGATGGCTTCGTCGCAGGGCCTCAAGAAGAACTACCGCTGCGACC GCTCGCTGCAGCAGTTCTACACGGGCGGGCCGTTCGCCGTCGGGAGCTCTCCCGGAGGCG GCGAAGGCGAAGTCGAAGGAGGCGAGGCCGAGGCCGAGGCGTTCCTCGCGTGCGCCTGCG GCGGGGAGGTGCGCCTGGTGTCCGCCGCCGACGCGTCCGCCATCGGGGAGCCGATCGAGG GCGAAAACGAGGCCGTCACGGCGCTCGCGCTGTCCCCCGACTCCCGCCTCCTCTTCACCG CGGGGCACAGTAGGCTTATTCGAGTCTGGGACCTCGCGTCCCGCACTTGCACACGCAGCT GGAAGGGGCACGATGGTCCTATTAGGGCCATGGCCTGCCATGCTTCTGGTGGGTTGCTTG CAACTGCTGGAGCAGACAAAAAGGTGTGCGTTTGGGATGTTGATGGTGGGTTTTGCACAC ATTTCTTTAGAGGCCACGCAGGTGTTGTGACGACTGTTATGTTCCACAAAGATCCGAAGC GCCTTCTGCTATTTTCTGGAAGTGAAGATGCCACTGTGAGAGTTTGGAACCTTGAAAGCA AAAAGTGTGTCGCTGTGCTGAAAGAGCATTTTTCAGCTGTGACATCATTAGCCTTATCTG AAGATGGACAAACATTGCTTAGTGCTGGGCGGGATAAGATTGTGAATGTGTGGGATGTTC GTAAGTACAACTCAAAGAAGACAATACCAGCATTTGAAATGATAGAAGATGTTTCCTTCA TTGGACCAGGAAGTAATTTATTGTCTTGTTTGGGTGAACCGGCAAATATAAAACGCAAAA CAGATGGTTATTTTCTTACGGTTGGTGAACGTGGAGTAGTTCGCATCTGGTGCTTGGAAA GTGCTCAGTGTATATATGAGCAGCAATCATCCGATGTAACCGTTAACACAGAGAATGAGG AGTCTAGAAGGGGTTTTACTTCTGCTGTTATGTTGTCAGATGATCAAGGACTGCTATGTG CCACTGCCGATCAGCAGTTTTTGTTCTACTGTCCCACGAGAACTGACGGAGGGGACTTCC AGCTGAACTTATATAAACGCCTAGTAGGTTATAATGATGAGATTCTTGATTTGAAGTTTG TTGGGGAGGATGAACAATATCTTGCTGTAGCTACTAACTTGGAGCAGGTCCGTGTTTATG ACGTTGCATCGATGTCATGTTCTTATGTGCTGTCTGGCCACACTGAAATTGTTGTTTGCA TCGACACTTGTATTTCTTCTTCTGGGAAGACACTTGTTGTGACTGGGAGCAAAGATAGCA CTGTGAGACTCTGGGATATGGAAAGGAGAAGCTGCATTGGTATTGGTAAAGGTCATCTGG GAGCTATTGGTTCCGTTGCATTCTCAAAGAAATCTAAGAATTTTTTTGTTAGTGGAAGCA GTGATCGGACCATCAAGATATGGAGCTGGGATGATACACTTGATGATGTTGGCAGTGAAG TTCCTCTCAAAGCAAAAGCTGTTGTAGCTGCACATGACAAAGATATTAATTCTCTTTCTG TCTCGCCTAATGACGGTCTTGTTTGCAGTGGTTCTGAGGACCGTACTGCATGCATATGGA AACTTCCAAACTTAGTGCCCTCTGTTGTCCTTAAAGGGCATAAAAGGGGCATTTGGTCAG TCGAGTTTTCTCCTGTGGAGCAGTGTGTCATTACATCATCTGGTGACAGAACAGTCAAAA TATGGGCTGTTGCTGATGGTTCATGCTTGAAGACATTTGAGGGCCATACATCTAGTGTTT TACGAGCCTCATTCCTTTCACACGGGACCCAATTTGTTTCTTGTGGAAGCGATGGCCTTG TTAAGCTATGGACCATCAAAACAAATGAATGCATTGCTACTTTCGATAAGCATGATGGGA AGGTTTGGGCACTGGCTGTTGGCAAGAAAACTGAAATGCTTGCTACTGGCGGAACTGATG CTGTTCTTAACCTTTGGCATGACTGTACCATGGAAGATAAACAGGAAGATTTTCGTAAAA AGGAGGAGGAACTGTTGAGAGGTCAGGAATTAGAAAATGCAGTATCAGATTATGACTATG CAAAAGCAATACAACTTGCATTTGAGCTTAGAAGACCCCACAGGCTTCTTGAGTTATTCA CACAGCTTTGCAGGGAGTCTGATCTGGAGGACCCAATAGAAAAAGCCCTTATTGGTCTTC CAAAGGAAGGGCTTCGCGTACTTCTTGAGTATATCCGGGAATGGAACACAAAACCTAAGC TTTGTCATGTTGCACAGTTTGTGCTTTTTCGGGTATTGAGGAGCTTGCCTCCCACTGATA TCCTGGAGATAAAGGGCATCAGTGAGCTCCTTGAGGGACTTATTCCATATTCACAGAGGC ATTTCAGCAGAGTTGATAGACTAGTACGAAGCACATTTTTATTGGATTACACCTTGACCC GGATGTCTGTTGTAGATCCGGACATAGATGAGGGCACAACCAGAGATGACGCAAATGGCT CATCAGTAGAGAATTGTGAAATTGCACAGGCGAAGCCTGATGCATTGGTAGCAGAAGAGA ACTTGCAAAAGTCGGTAAAGAAAAGAAAATCAAGCAAATCAAGCAAAAAAGGCGGTAAGA AGGTGAAGATTGCGTCCACGGGGGGCAGTAAGGATGTTCCTATTGAGGCTTAAATAGTTG ACAAACCGCAGTTATATGTTATTCGCACCACCAATTTTGTAGCTGCTGTTTTATCTGGTA TGTTGCAGCATGAATCACATGTTTTACCTTTTGACCCACTGTACAGAATGCATTCTTTGC TTGAGTTAGAAAGATCTGGTGGCTTTCAGTTCTAAATTTCTAAGTGCTTCAGAAAGTTTT ACCGTCCTTGATAGTTGTTGCCATCTTCTGCGTTGGGTACTTGGGTTAGTTTGCCTTGAT TAATTTCCATGTGTGTGTATGGCAGTGGCACGGAAGCGGTACCCAGCAGCAAATAAAGTT GCTTGCTCCACTTGTAATTGTTGGATCTGCGATCTGGATGTCGGCTCTCTTCATAATTCC CGTCCTTGTCATCTGGCAGAAATTTTTTATGGTTCGGT