Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0591000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29888205:29891194:-1 gene:Os04g0591000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0591000-01)
Sequence

ATGGCGGCGCTCTCCCTCGCGCGAAGCCCCCCCCACCACCACCACGCCGCGGCGGCGCTC
GCGCTCCCGGCCCCGCGCATTCCCCGGCTCGCGCCGCTCCTCCGCACCCCTCGCCGCCCC
CACCCGCTCATCGACATCCGCCGCCTCCCGGCCGCCGCGGTCGCGGCCTCCTCGCCTCCC
GAGGCGCAGGCGGTCGAGGATGGTGAGGAGGAGGAGGAGGAGGGGGGAGAGAAGCGGCGG
AAGCTGTACGTGGCCAACATCCCCTGGTCCTTCCCCGCGCCGGAGATCGAGAAGCTCTTC
GCGCAGTGCGGCGCCGTCAAGGACGTCGAGGTGATCAAGGGGAAGGATGGGAAGAAGAAG
GGGTTCGCGTTCGTCACGATGGCAACGGCGGAGGAGGCCGCCGCTGCTGTGGAGAAGCTC
AACTCCCTCGATGTCATGGGAAGGACCATCAGGGTGGAGTTTTCAAAGAGTTTCAGAAAA
CCTGCTCCTCCTCCTCCTCCGGGCACAATTTTGGAGAGGCACAAACTTTATGTGTCCAAT
CTCCCATGGAAAGCAAGGGCTCCCAATATGAAGGAGTTTTTCTCAAAATTTAATCCACTT
TCTGCTAAGGTGGTCTTTGATAGCCCATCAGGAAAATCAGCTGGTTATGGTTTTGTTTCT
TTTGGGACAAAAGAGGAAGCCGAAGCTGCTCTCACTGAACTCGATGGGAAGGAGCTTATG
GGAAGACCTGTTCGTTTGAGATGGCGACAAAGTGTAGATGATTCGGATGACAGTGTAAAG
GCTGATGGTGAAATTGAAGATGCAAATGTTGATGGCGAGGCTGAAGGTGTCACTGATAAT
GGTACTAAGGATCATGGTGAAGATAAACAGGAATAG

Peptide Sequence

PEP ID

Os04t0591000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29888205:29891194:-1 gene:Os04g0591000 transcript:Os04t0591000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0591000-01)
Sequence

MAALSLARSPPHHHHAAAALALPAPRIPRLAPLLRTPRRPHPLIDIRRLPAAAVAASSPP
EAQAVEDGEEEEEEGGEKRRKLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIKGKDGKKK
GFAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSKSFRKPAPPPPPGTILERHKLYVSN
LPWKARAPNMKEFFSKFNPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELM
GRPVRLRWRQSVDDSDDSVKADGEIEDANVDGEAEGVTDNGTKDHGEDKQE

Transcript Sequence

Transcript ID

Os04t0591000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29888205:29891194:-1 gene:Os04g0591000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0591000-01)
Sequence

CTCACGTTATCCGCGAGCGAACCAATGGCGGCGCTCTCCCTCGCGCGAAGCCCCCCCCAC
CACCACCACGCCGCGGCGGCGCTCGCGCTCCCGGCCCCGCGCATTCCCCGGCTCGCGCCG
CTCCTCCGCACCCCTCGCCGCCCCCACCCGCTCATCGACATCCGCCGCCTCCCGGCCGCC
GCGGTCGCGGCCTCCTCGCCTCCCGAGGCGCAGGCGGTCGAGGATGGTGAGGAGGAGGAG
GAGGAGGGGGGAGAGAAGCGGCGGAAGCTGTACGTGGCCAACATCCCCTGGTCCTTCCCC
GCGCCGGAGATCGAGAAGCTCTTCGCGCAGTGCGGCGCCGTCAAGGACGTCGAGGTGATC
AAGGGGAAGGATGGGAAGAAGAAGGGGTTCGCGTTCGTCACGATGGCAACGGCGGAGGAG
GCCGCCGCTGCTGTGGAGAAGCTCAACTCCCTCGATGTCATGGGAAGGACCATCAGGGTG
GAGTTTTCAAAGAGTTTCAGAAAACCTGCTCCTCCTCCTCCTCCGGGCACAATTTTGGAG
AGGCACAAACTTTATGTGTCCAATCTCCCATGGAAAGCAAGGGCTCCCAATATGAAGGAG
TTTTTCTCAAAATTTAATCCACTTTCTGCTAAGGTGGTCTTTGATAGCCCATCAGGAAAA
TCAGCTGGTTATGGTTTTGTTTCTTTTGGGACAAAAGAGGAAGCCGAAGCTGCTCTCACT
GAACTCGATGGGAAGGAGCTTATGGGAAGACCTGTTCGTTTGAGATGGCGACAAAGTGTA
GATGATTCGGATGACAGTGTAAAGGCTGATGGTGAAATTGAAGATGCAAATGTTGATGGC
GAGGCTGAAGGTGTCACTGATAATGGTACTAAGGATCATGGTGAAGATAAACAGGAATAG
TTTAACAATACTGTGTTTGGACTCGGAGAAAGTTACCAGCAGCCTCATTAATAGTACATA
TGTGGAGCCTCATTGTACAGCTACAAGTTTTTTACATTTCCTGATTTTAAACAGAGGAGA
TATTGTAATCAAATACTGCAATATATGTCTGTGGTTGACGGCTTGACGCTGATAAGGAGA
TGAGGAACAAAAGGGTGCCACCTCTGACCTAAGGTGAAAAATTGTTGTTGAATGGATTAA
TATTTTAAATTTTAGTGTTCATTTTCAGTAATGTATTTACTCTAATTATCTGTAATTTAT
TGTGATCATCAATCTTCTCCTGCTGAGACAATTGTTGTCTCAGCAACTTTTAGGT