Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0590900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29883339:29885139:-1 gene:Os04g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os04t0590900-01)
Sequence	ATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGATTGCTCTCAAGGG CTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCGCCGCCGCCCTTC GACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCCCCTCTCGTCATT GCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTACACCTTCATCTCC AAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCGAGCTCCGGTGGC GCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGGCAGTCGAGGAGC CACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTGATCAACAAGATC ACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGACTGCTCGGTCTGC CTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGGCTGCTACCCAGGTGCAGCCATGCCTTC CACCAGCAATGCATCGACACTTGGCTCAAGTCACACTCCAATTGCCCCCTCTGCCGCGCC AACATCACCTTCGTCACCGTCGGGTTGGCGTCGCCGGAGCCGGAGGGCTGTGCTCCAGGC GAGACTGGAGGTGACAATACACACGAGGTGGTTGTGGTGATGGATGGCTTGGAAAATCTT TGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGATGATCACGATGCG AAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATCAGAGAAGAAGGC TCGCCGCCAAAGAGGGGCGCGTCGTCGTTTGATCTTCACCGTGACAACCGCATGTGCATC GCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGGGAGAGTGGCCTC CTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGCAAGGGAAGGGGA GGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTGCCGGGGAAGAGA TTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGAAAAGATTCAGAT CATCCAATGTGA

Peptide Sequence

PEP ID	Os04t0590900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29883339:29885139:-1 gene:Os04g0590900 transcript:Os04t0590900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os04t0590900-01)
Sequence	MASSAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVI AIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRS HESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAF HQQCIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVVVVMDGLENL CEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCI ADVLQESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEALPGKR LPSGGRSCFSSKSGRGKDSDHPM

Transcript Sequence

Transcript ID	Os04t0590900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29883339:29885139:-1 gene:Os04g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os04t0590900-01)
Sequence	AAACTCCTCTCGTCCTCTCAGCCAGAGGCATCATCTTGATATCTCTCCCCATCCTCTCAC GACTCCCGACACCAAGAAAGCAAGTATACCATGGATTGAACATATACACGGCCGTCACAC ATCTGTCTCCTTCCCTCGTCTCCTCACCAATGATTCGGTCCAGAAACTTGCAGAGATCCT CTGCTAGTACTTGCACAGAGCCTCAGACCGAGCACTGAGGAAGCTTAACATCTGCCTATC TTCTTTCTAGTTCTTCCCTTTCTCTCTGTTGTTGCAGTCTTGCAGCTGCCCGATTTCGTG TTCTACGAGGCAATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGAT TGCTCTCAAGGGCTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCG CCGCCGCCCTTCGACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCC CCTCTCGTCATTGCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTAC ACCTTCATCTCCAAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCG AGCTCCGGTGGCGCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGG CAGTCGAGGAGCCACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTG ATCAACAAGATCACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGAC TGCTCGGTCTGCCTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGGCTGCTACCCAGGTGC AGCCATGCCTTCCACCAGCAATGCATCGACACTTGGCTCAAGTCACACTCCAATTGCCCC CTCTGCCGCGCCAACATCACCTTCGTCACCGTCGGGTTGGCGTCGCCGGAGCCGGAGGGC TGTGCTCCAGGCGAGACTGGAGGTGACAATACACACGAGGTGGTTGTGGTGATGGATGGC TTGGAAAATCTTTGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGAT GATCACGATGCGAAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATC AGAGAAGAAGGCTCGCCGCCAAAGAGGGGCGCGTCGTCGTTTGATCTTCACCGTGACAAC CGCATGTGCATCGCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGG GAGAGTGGCCTCCTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGC AAGGGAAGGGGAGGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTG CCGGGGAAGAGATTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGA AAAGATTCAGATCATCCAATGTGAGGCGGTCAGTTCTCATTTTCTTACTCTAGGATACTG GACAAGCAACCTTTGTTTGCATGATGAGATGCGAATGGGAAAAAATTGCAAGGACAATCA TCATAATCTGGAGATGTCGTCTTGTGATAATGTTGATCTGCTGCCTCACTCCATGTGATG CCACTGCCAAATCGATCCTCTGCAGTGCTTGGTTGGTAATGTCTCTTTTGTTCATAGTTG AGAAGGACCTGAGAGCTGATCTCTCTCTCTCTCTCTTTTGCTCTGCCATTTTATACATTA CATTGACTTCCCACCGTTCAATTTTTCTGTGGAGTTTGTTCTTCTGTGAGTTCACTAGTT C