Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0589900-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:29814044:29817970:-1 gene:Os04g0589900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsAHP1 description:Protein of unknown function DUF296 domain containing protein. (Os04t0589900-01);Similar to AT-hook protein 1. (Os04t0589900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0589900-03)
Sequence	ATGGATGGCCGGGAGCAGCAGCAGCAGCCGCGCGTGAGCTCGCCGCCGCCGGCCGGCGGC GGCGTGATGATGCCTCAGCACCCCTACGGCGCCGCGCCGGCGATGCCGCCGGGGTCGGCG AATGTTATGCACGGGGTGCCGCTCTCGTTCAACCCCATGGCGTCGCCGACCGCCTCGTCG CCTATGAAGCCCGCGGATATGTCGGGGACCATGTACCGCACCGATCCCGTCGTGCAGGGC ATGCAGCAGCAGCCCGGTTCCGGCGGTGGCGGCACGGCGGTCGGCGGAGGGGAGCTCGTG AAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGTCCTGACGGGAACATCGGGTTGGGACTG AAGCCCGCGGCTGCAGCAGGGACGGAGGCCGGCGGACCTTCAGGTGGTGCAGGATCGAAC TCGAACCCTGACGGGAAGCGCAGAGGGCGACCCCCAGGATCCGGGAAAAAAAAACAGCTA GATGCTTTGGGATCTTCCGGGACATCTTTTACTCCCCACATAATAACAGTGAAGCCTAAT GAGGATGTTGCTTCAAAAATAATGGCATTTTCACAACAAGGCCCTCGCACTACATGCATA ATTTCAGCAAATGGCGCTCTTTGCACAGCAACACTACGTCAACCAGCAACTTCTGGTGGT ATAGTAACATATGAGGGCCACTTTGATATTCTCTCTCTGTCGGGCTCATTTCTGCTCGCA GAGGATGGCGACACTCGTAGCAGAACAGGTGGTTTGAGTGTGGCACTTGCTGGAAGCGAT GGACGTATAGTTGGAGGTTGTGTTGCTGGAATGCTGATGGCAGCAACGCCCGTGCAGGTT GTAGTGGGGAGTTTCATTGCTGAAGGTAAAAAAGGCAAGGAAGAACATCTGAAACGTGAG CCAACATCTGCCCCGACGCCGAACCACGCAGCTGGCTTTGGCGCAGCCACGGCTGCCAGT CCTCCGTCTGATGGATCATCAAGCGACCACTCCGATGACCCAGGGAGTCCCATGGGACCT AATGGCAGCACATTCAATAATTCAGGTCATCCCATGCATTCTTCGTATGCTCCTGTTAGC TGGTCGCTATCTGGGAATCAAGGCCGTTACGATCCCGACCTGAAGATGATGACCGACTAG

Peptide Sequence

PEP ID	Os04t0589900-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:29814044:29817970:-1 gene:Os04g0589900 transcript:Os04t0589900-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsAHP1 description:Protein of unknown function DUF296 domain containing protein. (Os04t0589900-01);Similar to AT-hook protein 1. (Os04t0589900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0589900-03)
Sequence	MDGREQQQQPRVSSPPPAGGGVMMPQHPYGAAPAMPPGSANVMHGVPLSFNPMASPTASS PMKPADMSGTMYRTDPVVQGMQQQPGSGGGGTAVGGGELVKKKRGRPRKYGPDGNIGLGL KPAAAAGTEAGGPSGGAGSNSNPDGKRRGRPPGSGKKKQLDALGSSGTSFTPHIITVKPN EDVASKIMAFSQQGPRTTCIISANGALCTATLRQPATSGGIVTYEGHFDILSLSGSFLLA EDGDTRSRTGGLSVALAGSDGRIVGGCVAGMLMAATPVQVVVGSFIAEGKKGKEEHLKRE PTSAPTPNHAAGFGAATAASPPSDGSSSDHSDDPGSPMGPNGSTFNNSGHPMHSSYAPVS WSLSGNQGRYDPDLKMMTD

Transcript Sequence

Transcript ID	Os04t0589900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29814044:29817970:-1 gene:Os04g0589900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsAHP1 description:Protein of unknown function DUF296 domain containing protein. (Os04t0589900-01);Similar to AT-hook protein 1. (Os04t0589900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0589900-03)
Sequence	CCGGTGCATAGAGCTCACGTACAACCGCCGCGCCGAACGGTGCATGTGAACTGTTCGGCG AAACGCGCAGGTGAGGAGAGGTCGCGAGGAGCGGCTGCTGCGGCGGCGGCGGCGGCTTCG ATTCAGGTGGGGGTGGGTGCCCTAGGGTTTCGCTGCCGGGATGGATGGCCGGGAGCAGCA GCAGCAGCCGCGCGTGAGCTCGCCGCCGCCGGCCGGCGGCGGCGTGATGATGCCTCAGCA CCCCTACGGCGCCGCGCCGGCGATGCCGCCGGGGTCGGCGAATGTTATGCACGGGGTGCC GCTCTCGTTCAACCCCATGGCGTCGCCGACCGCCTCGTCGCCTATGAAGCCCGCGGATAT GTCGGGGACCATGTACCGCACCGATCCCGTCGTGCAGGGCATGCAGCAGCAGCCCGGTTC CGGCGGTGGCGGCACGGCGGTCGGCGGAGGGGAGCTCGTGAAGAAGAAGAGGGGGAGGCC GAGGAAGTATGGTCCTGACGGGAACATCGGGTTGGGACTGAAGCCCGCGGCTGCAGCAGG GACGGAGGCCGGCGGACCTTCAGGTGGTGCAGGATCGAACTCGAACCCTGACGGGAAGCG CAGAGGGCGACCCCCAGGATCCGGGAAAAAAAAACAGCTAGATGCTTTGGGATCTTCCGG GACATCTTTTACTCCCCACATAATAACAGTGAAGCCTAATGAGGATGTTGCTTCAAAAAT AATGGCATTTTCACAACAAGGCCCTCGCACTACATGCATAATTTCAGCAAATGGCGCTCT TTGCACAGCAACACTACGTCAACCAGCAACTTCTGGTGGTATAGTAACATATGAGGGCCA CTTTGATATTCTCTCTCTGTCGGGCTCATTTCTGCTCGCAGAGGATGGCGACACTCGTAG CAGAACAGGTGGTTTGAGTGTGGCACTTGCTGGAAGCGATGGACGTATAGTTGGAGGTTG TGTTGCTGGAATGCTGATGGCAGCAACGCCCGTGCAGGTTGTAGTGGGGAGTTTCATTGC TGAAGGTAAAAAAGGCAAGGAAGAACATCTGAAACGTGAGCCAACATCTGCCCCGACGCC GAACCACGCAGCTGGCTTTGGCGCAGCCACGGCTGCCAGTCCTCCGTCTGATGGATCATC AAGCGACCACTCCGATGACCCAGGGAGTCCCATGGGACCTAATGGCAGCACATTCAATAA TTCAGGTCATCCCATGCATTCTTCGTATGCTCCTGTTAGCTGGTCGCTATCTGGGAATCA AGGCCGTTACGATCCCGACCTGAAGATGATGACCGACTAGATAATCCTGTGTTTTTAAGC TCTGTTAGCTGTTGACCCAGTAGAGTGTAGGGATCAGGGATTCAGTGTTTCCTGCACCGA CACCACCGGCAGCGTTGGCCAATAATCCGGTGCGCTAGTAGTAATCAGTATCACAATGCC TGAACAAAAGAGATCAGGAACAAATAAGTAGCCCCAGCGCATGGCTTGGCCTGTCAGGTA GCTAATTTTTATTTTTCTCAATCGGTAGCTTATTTAGCATGCTTTGTCAGTTGTCAGCCT AGTTGTACGGTTTTCTTATGAATGTTTGTACACCTTTTTCTTTTCTCGCTAGTATTCGGC GTGTACGAATCTTAATTAAGATTGGAATGACATGTTATTGGATATTGTCGTTTTTC