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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0589800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29811954:29812662:1 gene:Os04g0589800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 description:Late embryogenesis abundant (LEA) group 1 family protein. (Os04t0589800-01)
Sequence

ATGCAGACGGCGAAGGTGAAGGTGCAGGACATGGTGAGCGGTGCCAAGGAGAAGGTGAAG
GAGGGGACGGCCAAGGCGCACGGCAAGGCCGGCCAGGCGACGGCGGCCACGCACGGCGAG
AAGGAGATGGCCAAGCAGGAGGAGAAGGCCGGCAAGGCACAGGCCAAGGCCGACGAGCAC
CAGGAGAGGGCGGAGCACCGCGCCAACGCCACCACGGGCCGCCACGGCACGCGCGTGCCG
CTTACGGCCGGCGGCAACCGCCACCACCACGCTCCGGTCGGCGGCCCCGCCGTCGACCCT
GCATACCCGGCCGCCGGCACCGGCACCGGCACCGGCACGTACGCGGCGTCCGACAAATCG
TACATCTAG

Peptide Sequence

PEP ID

Os04t0589800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29811954:29812662:1 gene:Os04g0589800 transcript:Os04t0589800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 description:Late embryogenesis abundant (LEA) group 1 family protein. (Os04t0589800-01)
Sequence

MQTAKVKVQDMVSGAKEKVKEGTAKAHGKAGQATAATHGEKEMAKQEEKAGKAQAKADEH
QERAEHRANATTGRHGTRVPLTAGGNRHHHAPVGGPAVDPAYPAAGTGTGTGTYAASDKS
YI

Transcript Sequence

Transcript ID

Os04t0589800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29811954:29812662:1 gene:Os04g0589800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 description:Late embryogenesis abundant (LEA) group 1 family protein. (Os04t0589800-01)
Sequence

AAAACACGTCGCAAGTCGAAGCACAAAACGCAAGCAACGAATCTCAATCCACAGGCTCAC
ACTGATACGCAACGCACGTAGCTACTGTACTGTAGGAGCAAAAGAAAAGAAAAGATGCAG
ACGGCGAAGGTGAAGGTGCAGGACATGGTGAGCGGTGCCAAGGAGAAGGTGAAGGAGGGG
ACGGCCAAGGCGCACGGCAAGGCCGGCCAGGCGACGGCGGCCACGCACGGCGAGAAGGAG
ATGGCCAAGCAGGAGGAGAAGGCCGGCAAGGCACAGGCCAAGGCCGACGAGCACCAGGAG
AGGGCGGAGCACCGCGCCAACGCCACCACGGGCCGCCACGGCACGCGCGTGCCGCTTACG
GCCGGCGGCAACCGCCACCACCACGCTCCGGTCGGCGGCCCCGCCGTCGACCCTGCATAC
CCGGCCGCCGGCACCGGCACCGGCACCGGCACGTACGCGGCGTCCGACAAATCGTACATC
TAGATTTGGGGTAGATGGACATGGGCGGGCTTGATCGATCTGGATCGCTAGTGTGTTTTT
TTTCAGTGTAGCGAGTGATCTGGTCCCAGCCCGGCCGCTGATCGTGTTAGCTTGTGTTCG
TACGCACGCGTGTATGCTGTGTGCACATGCGTGTGCTGGAATAAAAAGTGTCAGATGTAA
AATTAACATGCTTGATGTAGTTCTGTTCAATGAAAGGGCTTTCGTTTTC