Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0587300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29658700:29660577:1 gene:Os04g0587300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 10 description:Similar to Purine permease-like protein. (Os04t0587300-01)
Sequence

ATGGCGGACAGTAACGCCGGCGGCAACAACAGTAGCGGTGCCGCGAACAACGCCGAGGTC
CAGATACCGATCCCAGCTCCATCCAAGGCTGAAGCTGCAGCAGCTCCGGAAACACCAGCA
GGCAAGCCATTTCGATGGTGGGCGATGGTGGCAGTGGACGTCTTCTTCCTCATCGCCGGT
CAGACATCGGCGACACTGCTGGGCAGATACTACTACACCCAAGGCGGCCGCAGCAAGTGG
ATATCGGCGTTCGTGCGGACGGCCGGCTTCCCGATACTGTTCTTCACCCTCTTCTTCTTC
CCCTCGAAGTCACCGTCCTCCTGCACCAACACTCCCATGGCCAAGCTCGCCGTGATATAC
ATCGTCCTGGGCCTCATCATCGCCGCCGACGACATGATGTACACTGGTGGCCTCAAGTAC
CTCCCCGCTTCGACCTACTCGCTCATCTGTGCCAGCCAGCTCGCGTTCAATGTCGTCTTC
TCATACGTGCTCAACTCCCAGAAGGTCACTCCTCTGATATTCAACTCCGTCGTGCTGCTC
ACCATGTCCGCTTCGCTCATCGGAGTCAGCAAGGAGTCTCAGGGGGTCACCGGCGTCTCG
GGAGGGAAGTATCTGCTCGGTTTCGTGCTGACGCTGGGGGCGTCGTGCACCTACTCGCTG
ATCCTCGCGCTGATGCAGCTCACCTTCGAGACCATCATCAAGAAGCACACCTTCTCAGCC
GTCCTCAACATGCAGATCTACACGGCGCTCGTGGCGACGGCCGCGTCGGTGGTCGGGCTG
TTCGCGAGCGGCGAGTGGAGGTCGCTGAGGGGGGAGATGAACGCGTTCAGGTCGGGGCAG
TTCTCCTACCTGATGACGCTGCTGTGGGCGGCCGTGTCGTGGCAGGTGGCCAACATCGGG
GTGCTCGGCCTCATCTTCGAGGTGTCGGCGCTCTTCTCCAACGTGATCAGCACGGTGTCA
CTGCCGGTCATCCCGTTCTTCGCGGTGGTGGTGTTCCACGACAGGATGAACGGGGTGAAG
ATCGTGGCCATGCTGATTGCAATTTGGGGATTTATTTCGTATCTGTTTCAGCACTATCTA
GATGGCAAGAAAGCGAAGAAGGCTTCATCGGGTGATAGTGCGCAGGGGTGA

Peptide Sequence

PEP ID

Os04t0587300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29658700:29660577:1 gene:Os04g0587300 transcript:Os04t0587300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 10 description:Similar to Purine permease-like protein. (Os04t0587300-01)
Sequence

MADSNAGGNNSSGAANNAEVQIPIPAPSKAEAAAAPETPAGKPFRWWAMVAVDVFFLIAG
QTSATLLGRYYYTQGGRSKWISAFVRTAGFPILFFTLFFFPSKSPSSCTNTPMAKLAVIY
IVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKVTPLIFNSVVLL
TMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLILALMQLTFETIIKKHTFSA
VLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSYLMTLLWAAVSWQVANIG
VLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVAMLIAIWGFISYLFQHYL
DGKKAKKASSGDSAQG

Transcript Sequence

Transcript ID

Os04t0587300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29658700:29660577:1 gene:Os04g0587300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 10 description:Similar to Purine permease-like protein. (Os04t0587300-01)
Sequence

GGATCTCACAGGGTGGCAGTTCCTCGAATAAAAAAATGGCGGACAGTAACGCCGGCGGCA
ACAACAGTAGCGGTGCCGCGAACAACGCCGAGGTCCAGATACCGATCCCAGCTCCATCCA
AGGCTGAAGCTGCAGCAGCTCCGGAAACACCAGCAGGCAAGCCATTTCGATGGTGGGCGA
TGGTGGCAGTGGACGTCTTCTTCCTCATCGCCGGTCAGACATCGGCGACACTGCTGGGCA
GATACTACTACACCCAAGGCGGCCGCAGCAAGTGGATATCGGCGTTCGTGCGGACGGCCG
GCTTCCCGATACTGTTCTTCACCCTCTTCTTCTTCCCCTCGAAGTCACCGTCCTCCTGCA
CCAACACTCCCATGGCCAAGCTCGCCGTGATATACATCGTCCTGGGCCTCATCATCGCCG
CCGACGACATGATGTACACTGGTGGCCTCAAGTACCTCCCCGCTTCGACCTACTCGCTCA
TCTGTGCCAGCCAGCTCGCGTTCAATGTCGTCTTCTCATACGTGCTCAACTCCCAGAAGG
TCACTCCTCTGATATTCAACTCCGTCGTGCTGCTCACCATGTCCGCTTCGCTCATCGGAG
TCAGCAAGGAGTCTCAGGGGGTCACCGGCGTCTCGGGAGGGAAGTATCTGCTCGGTTTCG
TGCTGACGCTGGGGGCGTCGTGCACCTACTCGCTGATCCTCGCGCTGATGCAGCTCACCT
TCGAGACCATCATCAAGAAGCACACCTTCTCAGCCGTCCTCAACATGCAGATCTACACGG
CGCTCGTGGCGACGGCCGCGTCGGTGGTCGGGCTGTTCGCGAGCGGCGAGTGGAGGTCGC
TGAGGGGGGAGATGAACGCGTTCAGGTCGGGGCAGTTCTCCTACCTGATGACGCTGCTGT
GGGCGGCCGTGTCGTGGCAGGTGGCCAACATCGGGGTGCTCGGCCTCATCTTCGAGGTGT
CGGCGCTCTTCTCCAACGTGATCAGCACGGTGTCACTGCCGGTCATCCCGTTCTTCGCGG
TGGTGGTGTTCCACGACAGGATGAACGGGGTGAAGATCGTGGCCATGCTGATTGCAATTT
GGGGATTTATTTCGTATCTGTTTCAGCACTATCTAGATGGCAAGAAAGCGAAGAAGGCTT
CATCGGGTGATAGTGCGCAGGGGTGATCAGATTAGGTGGCCACAGTGATATTATCGTGGT
AGAGATTGATTGCTCTCCGCCAATAATCTTAGCTAGTTTTGTTGGCTGCGAGGTACTAGA
TGTTCGTTACTTATGTTATGTTGCAGGTTGTTCGTCAGATAAAAACTAGTACGTACTTTG
TTTTTTTGTGTTGCCAACGTGTTCAGATGTACAATTTTGCTGGATTACTAGTAGTTTTCT
TGTTCTTTTCTTCATGTGCGTTTGTGTAAGGGTATGACGCATAATTGTATATCACGAAAG
AATAGAAATAGTAGTACTAGACTAGTAAAGAACTCTTTATTTGCTT