Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0587200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:29656077:29656696:1 gene:Os04g0587200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to invertase inhibitor. (Os04t0587200-00)
Sequence

ATGACGACCATGAAGCTTGTGCGATCGTTCTCTCCTCTCATCGTCTTCTCCTTGCTCCTC
CTGCTCACCTCCTCCACGACGTCCAGAGCCTCCCTCGTGGACGACGCCTGCACGTCGTTC
GCGGCTAGCCACGCGGACATCGGCTACGCCTACTGCGTCAGGTTCTTCCAGTCCGACGAG
GGCAGCGCCACCGCGGACAGGTACGGCCTCGCCGCCATCGCCGTGAAGATCAGCGCGGCG
ACGGCCAGGGGCACCGCCAAGCGCATCGCGGACCTGCAGGACCTGGAGCGCGACAAGAGG
AGGAAAGATTGCCTGAGCGCGTGCGGGGAGGTGTACGACTCCGCCGTGGACAGCCTCGAC
GAGGCGGCCAAGGGCATCGCGTCGCGCAGCGCCGACGGCCTGCGGGACGCGGTGACCGTG
CTCAGCGCCGCGCTGGACACCCCCGACACGTGCGAGGACGGGTTCCGCGAGCTCGGCCTG
GCCTCGCCGCTGGTCGCCGAGGACGAGGAGTTCAGCAAAGAGTCGGCCATCGCTCTCGGT
GTCACATCGGCCTTATCGCCGCCGAGCTAG

Peptide Sequence

PEP ID

Os04t0587200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:29656077:29656696:1 gene:Os04g0587200 transcript:Os04t0587200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to invertase inhibitor. (Os04t0587200-00)
Sequence

MTTMKLVRSFSPLIVFSLLLLLTSSTTSRASLVDDACTSFAASHADIGYAYCVRFFQSDE
GSATADRYGLAAIAVKISAATARGTAKRIADLQDLERDKRRKDCLSACGEVYDSAVDSLD
EAAKGIASRSADGLRDAVTVLSAALDTPDTCEDGFRELGLASPLVAEDEEFSKESAIALG
VTSALSPPS

Transcript Sequence

Transcript ID

Os04t0587200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29656077:29656696:1 gene:Os04g0587200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to invertase inhibitor. (Os04t0587200-00)
Sequence

AAAGCCATGACGACCATGAAGCTTGTGCGATCGTTCTCTCCTCTCATCGTCTTCTCCTTG
CTCCTCCTGCTCACCTCCTCCACGACGTCCAGAGCCTCCCTCGTGGACGACGCCTGCACG
TCGTTCGCGGCTAGCCACGCGGACATCGGCTACGCCTACTGCGTCAGGTTCTTCCAGTCC
GACGAGGGCAGCGCCACCGCGGACAGGTACGGCCTCGCCGCCATCGCCGTGAAGATCAGC
GCGGCGACGGCCAGGGGCACCGCCAAGCGCATCGCGGACCTGCAGGACCTGGAGCGCGAC
AAGAGGAGGAAAGATTGCCTGAGCGCGTGCGGGGAGGTGTACGACTCCGCCGTGGACAGC
CTCGACGAGGCGGCCAAGGGCATCGCGTCGCGCAGCGCCGACGGCCTGCGGGACGCGGTG
ACCGTGCTCAGCGCCGCGCTGGACACCCCCGACACGTGCGAGGACGGGTTCCGCGAGCTC
GGCCTGGCCTCGCCGCTGGTCGCCGAGGACGAGGAGTTCAGCAAAGAGTCGGCCATCGCT
CTCGGTGTCACATCGGCCTTATCGCCGCCGAGCTAGGATGACGTCACAAGAGTTACAGCG
TCTGTAATCCTATAAATCCT