Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0587100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29654080:29654740:1 gene:Os04g0587100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0587100-01)
Sequence

ATGGCTTTTCTGAGGGCACTCTCTCCTCTCGTCTTCACCCTGCTCCTCCTACTCGCCGCC
TCCACATCCGACGCCTCCATCTTGGAGGAAACCTGCAAGTCGCTCGCCGGTAACCACACG
GCCATCGACTACCCCTACTGCGTCAGGTTCTTCCAGGCCAGCAAGGAGAGCGCCACCGCC
GACACGCACGGCCTCGCCGCCATCGCCGTGAGGATCACCGAGGCGGCCGCCGAGGGCACC
GCCAAGCGCATCGCCGCCCTGCGATCCTCGCACAAGGAGGAGAAGATGCAGGAGTGCCTC
CGCATAAGCTCCGACCTGTACGCCTACATGCTGGCCGTTCTCGGCAACGAGGCGAAAGCC
GCCGCCCTGGTGGACGGCGGCGCGCAGCATGCGGCGGCGTCGCCGCCAACGCCCGACGTC
GCGCGGTATGTCGCGGATGGTTGCGAGGGCAGGTTCCGTGGGAACAAGGAGACCCTGCCG
CTGGTTGCGGAGTACGCCGAGTTTAGACAGAGTGCGTCCATTGCTCTCGCATTGATAGAG
GCGATATCACCACCGAGTGATCAGTGA

Peptide Sequence

PEP ID

Os04t0587100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29654080:29654740:1 gene:Os04g0587100 transcript:Os04t0587100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0587100-01)
Sequence

MAFLRALSPLVFTLLLLLAASTSDASILEETCKSLAGNHTAIDYPYCVRFFQASKESATA
DTHGLAAIAVRITEAAAEGTAKRIAALRSSHKEEKMQECLRISSDLYAYMLAVLGNEAKA
AALVDGGAQHAAASPPTPDVARYVADGCEGRFRGNKETLPLVAEYAEFRQSASIALALIE
AISPPSDQ

Transcript Sequence

Transcript ID

Os04t0587100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29654080:29654740:1 gene:Os04g0587100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0587100-01)
Sequence

AGCAAGAACACCATGGCTTTTCTGAGGGCACTCTCTCCTCTCGTCTTCACCCTGCTCCTC
CTACTCGCCGCCTCCACATCCGACGCCTCCATCTTGGAGGAAACCTGCAAGTCGCTCGCC
GGTAACCACACGGCCATCGACTACCCCTACTGCGTCAGGTTCTTCCAGGCCAGCAAGGAG
AGCGCCACCGCCGACACGCACGGCCTCGCCGCCATCGCCGTGAGGATCACCGAGGCGGCC
GCCGAGGGCACCGCCAAGCGCATCGCCGCCCTGCGATCCTCGCACAAGGAGGAGAAGATG
CAGGAGTGCCTCCGCATAAGCTCCGACCTGTACGCCTACATGCTGGCCGTTCTCGGCAAC
GAGGCGAAAGCCGCCGCCCTGGTGGACGGCGGCGCGCAGCATGCGGCGGCGTCGCCGCCA
ACGCCCGACGTCGCGCGGTATGTCGCGGATGGTTGCGAGGGCAGGTTCCGTGGGAACAAG
GAGACCCTGCCGCTGGTTGCGGAGTACGCCGAGTTTAGACAGAGTGCGTCCATTGCTCTC
GCATTGATAGAGGCGATATCACCACCGAGTGATCAGTGAATGTGTGTTTTTACTCTCAGA
TTTTGTAAGCCAAACAATGTAGATGAATAAACATGGCAATTATCAATCTATTGTTTTCCT
G