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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0586200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29624421:29625055:-1 gene:Os04g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0307D04.13 protein. (Os04t0586200-01)
Sequence

ATGGCACGGTCCCTCGCATGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGACCGGG
CGGCACGCGCTGGACGCCTGCGCGCTCTGCACCAAGCCGCTGCGCCGCGATAGCGACATC
TTCATGTACAGAGGGGACACCCCCTTCTGCAGCGAGGAGTGCCGCTACGAGCAGATGCAC
CTCGACGCCGCCTGCGCGAGGCAGGCCGCGAGCGCCAGGCGGAAGCAGCAGCAGCAGGGG
CAGCGGAGCAGGCACGAGACCGCGCCGGCGGCGCCCGTGTCCCGGAAGGCGGGGGTGTCC
GTGGCGAGCTGTTGA

Peptide Sequence

PEP ID

Os04t0586200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29624421:29625055:-1 gene:Os04g0586200 transcript:Os04t0586200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0307D04.13 protein. (Os04t0586200-01)
Sequence

MARSLACAFFFDAEPVGETGRHALDACALCTKPLRRDSDIFMYRGDTPFCSEECRYEQMH
LDAACARQAASARRKQQQQGQRSRHETAPAAPVSRKAGVSVASC

Transcript Sequence

Transcript ID

Os04t0586200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29624421:29625055:-1 gene:Os04g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0307D04.13 protein. (Os04t0586200-01)
Sequence

GATGGCACGGTCCCTCGCATGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGACCGG
GCGGCACGCGCTGGACGCCTGCGCGCTCTGCACCAAGCCGCTGCGCCGCGATAGCGACAT
CTTCATGTACAGAGGGGACACCCCCTTCTGCAGCGAGGAGTGCCGCTACGAGCAGATGCA
CCTCGACGCCGCCTGCGCGAGGCAGGCCGCGAGCGCCAGGCGGAAGCAGCAGCAGCAGGG
GCAGCGGAGCAGGCACGAGACCGCGCCGGCGGCGCCCGTGTCCCGGAAGGCGGGGGTGTC
CGTGGCGAGCTGTTGATGAGCTGCATACCTTAGGTAGACGAGCGTGAGCTTGCAAGATGT
GATGAAGGAGTTGTTCTTGCTCATGTCTGGCCGGCCGCTGTGCCGATGGATGGATCTGGT
CGGAGTCGAAGCAGAGAAAGGACGGATCTGAGGAAGGGACTCCGAGATTCACCAGGCACC
ATGGTTTAATTTAGGCCATGTGTGCTTCTCTTTTTTTTCCCCTTTTGGTTGGCTCCTTTT
GTATGAGGAGCTGATCTGAGTTGGTGTGAAGAGCAATTCCGCTGTAAATATTCGAGGCAT
TCCGAGAAGTTCTATTGAGCCATAATTTTTTGAGC