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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0586100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29620862:29621588:-1 gene:Os04g0586100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF581 family protein. (Os04t0586100-01)
Sequence

ATGGCGGCGTCTCTTGCCTGCGCTTTCTTCTTCGACGCCGAGCCGGTGGGCGAGCAGGGC
AGGCACGCGCTGGACGCCTGCGCGCTCTGCACCAAGCAGCTCACGAGGGACAGCGACATC
TTCATGTACAAGGGGGACACGCCCTTCTGCAGCGAGGAGTGCCGCTACGAGCAGATGCAG
CTCGACGCGGTGTACGCGAGGTCGGCCGGACGGAGGCAGCAGCAGCAGTACTCCGGGAGG
GCGGATTCGCGGCGCGGGCACCGGGAGACCAGGAAGGTGTCCGTGGCGAGCTAA

Peptide Sequence

PEP ID

Os04t0586100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29620862:29621588:-1 gene:Os04g0586100 transcript:Os04t0586100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF581 family protein. (Os04t0586100-01)
Sequence

MAASLACAFFFDAEPVGEQGRHALDACALCTKQLTRDSDIFMYKGDTPFCSEECRYEQMQ
LDAVYARSAGRRQQQQYSGRADSRRGHRETRKVSVAS

Transcript Sequence

Transcript ID

Os04t0586100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29620862:29621588:-1 gene:Os04g0586100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF581 family protein. (Os04t0586100-01)
Sequence

CACCAACAACTCATCGCCTCGCTTCTTCTTCCCACTAGCCAAAAGCACAAACCACCGAGA
AAACGCTTCTCAGATAAACATCATCACCATGGCGGCGTCTCTTGCCTGCGCTTTCTTCTT
CGACGCCGAGCCGGTGGGCGAGCAGGGCAGGCACGCGCTGGACGCCTGCGCGCTCTGCAC
CAAGCAGCTCACGAGGGACAGCGACATCTTCATGTACAAGGGGGACACGCCCTTCTGCAG
CGAGGAGTGCCGCTACGAGCAGATGCAGCTCGACGCGGTGTACGCGAGGTCGGCCGGACG
GAGGCAGCAGCAGCAGTACTCCGGGAGGGCGGATTCGCGGCGCGGGCACCGGGAGACCAG
GAAGGTGTCCGTGGCGAGCTAATCAAGCTGCGTCGATAATATAATGATCAGCTGAGAAGA
ATTGGCGTTGAATCCAGACGAGATTTCAAGAGCTAAGCCACGCATCAACATGCGGCGACG
AAGGAGATTGATTTCTCCAAGGCCGCGATGCCCGACGGCGCCGGAGAAGAGTCTGAGGAA
GTTCATCGGCAAGATGAGATCTTTGCCATGTGGGTCGCTCGGGTCGACCTTGTCTTGGCT
CTCAGATTGGCGCCCTTTTGCGGGTCGTGTCGCGTTTGTGCGCCAGCGTGCGCGTTAGAG
CCTGAGTGTATCATCACTTTGTAAATCCAAAGCAGTTGGGAAGGCTTTAAAGTTTCCAAG
TTCCTAC