Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0584800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:29538736:29541983:1 gene:Os04g0584800 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP1/OBG domain containing protein. (Os04t0584800-01);Hypothetical conserved gene. (Os04t0584800-02)
Sequence

ATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGCGTCCTCGTCGTCGGCGCGCCT
GGCGTCGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACAT
GACTTGTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGCA
GATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCAT
CTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCTT
ACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATT
GGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATG
CAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAAC
GAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCC
GCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGCT
GACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGA
GCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTT
CCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTAC
GAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCA
AGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTG
GATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACT
GCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAAC
ACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTT
GAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATG
CGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCC
ATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGA

Peptide Sequence

PEP ID

Os04t0584800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:29538736:29541983:1 gene:Os04g0584800 transcript:Os04t0584800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP1/OBG domain containing protein. (Os04t0584800-01);Hypothetical conserved gene. (Os04t0584800-02)
Sequence

MESGAGSLEARPGVLVVGAPGVGKRTILSRLLAAEIPDTHDLSSGVLCQGWNIDTKYYSA
DLSVWTAHLGQGFSLDSLPHLDQLDALVMVFDMSDESSFLTLQNWVSSVDVQRFEILLCI
GNKADLVLGHGAHVEYRRRMQKIGESSTDPHPEYLDFGINESEGCGLLSEEEPQIEIRDS
ASHWCIEHNIEYVKACASNADFDKCLSVNGDSQGLERLLGALSAHMWPGMILKSGNRITV
PSLVEKEESTDDESNYEFEYEVLSHGSDEQWEFIGESSTSRDLEGLNEDTATHDKTNQVV
DADANSVASNPLPNGRMTETAEEKLVPQSHKSEVSNDMDNTQADASEKLQAGIPEGNKLF
EDEHYGLDDLERLMSEIGNMRSNLRLMPDFQRKEMAAKLAMKMATMFGDNDEEGSEDI

Transcript Sequence

Transcript ID

Os04t0584800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:29538736:29541983:1 gene:Os04g0584800 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP1/OBG domain containing protein. (Os04t0584800-01);Hypothetical conserved gene. (Os04t0584800-02)
Sequence

CTGCTTACCGCCTTCTACTCCGTCTTCTTCCTCCTCTCTCTCTCTCTCTCTCCCTCGTTG
CCGTCGCGACTCGCGAGGAAGACTGGTGTTTTGGGGGTACAGGGTTTGGTTCATCGAGGC
GATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGCGTCCTCGTCGTCGGCGCGCC
TGGCGTCGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACA
TGACTTGTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGC
AGATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCA
TCTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCT
TACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCAT
TGGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTAT
GCAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAA
CGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTC
CGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGC
TGACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGG
AGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGT
TCCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTA
CGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTC
AAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGT
GGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAAC
TGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAA
CACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATT
TGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACAT
GCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGC
CATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGATT
CAATTCACGGAGCCCACCTTTTGCATGTCTTCAAACATATGTTCCCAGTTTATGGCGTGC
TGATTTGTACAGGCAGATGGGCCGCAGGCCGTGTAGGCATTTCCATCGGCTATCATAATT
CCCAGTGAAATTTTGTACCTTAGTAGTTCCATATTTACCATTCTTACTGCTGTAAGTTGT
ATACTGTATTATTTGAAATTAAAGTTCTCT