Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0583900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29500955:29503774:-1 gene:Os04g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE ELONGATED HYPOCOTYL description:Similar to LHY protein. (Os04t0583900-01)
Sequence	ATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTT GGGCACCAAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATG ATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAG AAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCC TGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCA CAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTTGGGT GCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTAC CCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAG CCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTA ACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCG ACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATG GAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACA TGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGAT TTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTG GACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCA GAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCT AACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGT GTTACTTGCACCCAGTTTTCAAACCCACAGGTGGTAGCCTCAGATCAACAGCATCAACAC CAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCA AATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCA TATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGT GTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGAT AGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGG CTGTGCTTATAA

Peptide Sequence

PEP ID	Os04t0583900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29500955:29503774:-1 gene:Os04g0583900 transcript:Os04t0583900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE ELONGATED HYPOCOTYL description:Similar to LHY protein. (Os04t0583900-01)
Sequence	MARFQETKARNDQGPVADHVGHQNLMENLTDPLDSSGMDMMDEARIPKARKPYTITKQRE KWTEDEHKLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKFFSKVIKESSGDNCNSLG AASSIQIPPPRPKRKPVHPYPRNLGSTASKNVPALKQLEKPQLQVQSLYDQDNGSPTSVL TVPQIRADTLGSESGGSPTSTIDIEERCPTPSIATAELAMELPPTNDEEVKGNGDHEEVT CDRSGVPVLRLFGKRVMVNDLHQMSAPDAGNLQTVADMEVDASAETPTSGTGKFSSHGAA EANTWNPWLTNTQQFLYYLPNGQIFSVHSALPCFTYHNEGVTCTQFSNPQVVASDQQHQH QTSEAVDYKGIQREGSWTESNTSSSSVPETATHNSETTESYRNGNRNEDEMVPSPDSRKC VSPGSNCRRGFVPYKRCVADSEALLKSQAPQEEADGEMTRLCL

Transcript Sequence

Transcript ID	Os04t0583900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29500955:29503774:-1 gene:Os04g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE ELONGATED HYPOCOTYL description:Similar to LHY protein. (Os04t0583900-01)
Sequence	TTTCCCCTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGC TTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTT GCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCT TGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTT TCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCAAAA CCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGC GCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGA GGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCAT CCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTT CTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTTGGGTGCTGCATCATC AATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCT AGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCA GGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACA GATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATAT TGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCC TACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATC AGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGAT GTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGC TGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATAC ATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAAT TTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCAC CCAGTTTTCAAACCCACAGGTGGTAGCCTCAGATCAACAGCATCAACACCAAACTTCTGA AGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTC AAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGG AAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGG TTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCT GCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATA AATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCA CAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGAT TGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGGCCGTGGTTCTTGTCTGGCCATGTA CAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATT GCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTA GAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCG AGCTAAAGAAAACAACGTTGGAAAGCTTTGTTC