Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0583101-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29455859:29458114:1 gene:Os04g0583101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0583101-01)
Sequence	ATGGCCAAATGCTACTCGGAGTGGCCTCCTCTCCCCCCTCTCCATCCACCGAGACGAACA CCATCGCAGACCTCGCTTTGGACGATCAGGAGGCAGCTTGCGTCGTTCGTCTTGCACTGC TCCAGGTCGTGTGCTTCCCCTCTTCTTGAGCCCAAGAATTTGCCCGATGAGTTCCATGCT GTGTCTGCCTCGACGCCGGCGCCGGTGCCGGTGTCCCCGCTTCCGGATGCTCCGAAGCTC GGCATATCCAACAAGTTCATCCGGGGCCTCTGCAGCGACCGGCAGACCGAGCAGCTCGCC TTCGAGTGCTACAGGAGGGCTCTGCACCAGCCGGAGTTCCTGCCGGACAAGAAGACGATG AACGCCCTGACCGTGCAGCTGCTCAGGGCTAAGCAGTGGAGCTCGCTGGAGTTCCTGGTT GAAGATTTCAGGGCCTATGGGGTGATGCCGGAGCGGCGGACGTGCGCGCGGCTCGTCGCG AGCTGCGTCAAGGCGAGGAAGTTCGGGCTCGCCGACATGGTGCTCGGGGTCCTCGAAGGC AAGAGGGGTGCACCTGCCGCTGTCGCCTTCAGCTCGGCGATGCAGGCGTACAACAAGCTG CACATGTACCGGAGCACGCTGCTGGTGTACGAGCGGATGAGGGCGGCTCGGTTGTCGCGC GACGCCGACGCCTACCGCGCCGTGATGGCGGCGTGCGGGGCGTTGGGCAAGCCGGAGATG GTGGCTTCACTGCTCAAGCAGTACAAGTCCCACAAATGGTACCCCTCTGAAAGCTGTGTC GAGACATACGCCATCGTCTGCGACGCACTCGGACGAGCAGGTAGAGCCTCGGATGCGCTG AAATGCCTGCGAGAGATGGAAGCAGACGGCATCGCGCCGAATGCCACAATCTACTCTTCG ATCATCAGATCTTTGGCAGATGCCCATGAATCTTCTGCAGCAGAAGACCTGTACAACGAA GCATGGAAGAAAGGGAGGCTGGGGGATCCGGACATGTTCCTGAAGGTGATCGTCATGCAT GTTGAGGCCGGGAGAGTGGAGAAGATAATGGGAGTTGCCAAGGACATGAGGGAGACTGGT CTGAGGGTCACCGATTGTATCCTATCAACCATTGTCAATGGCTTTGTGAAGAGGAGAGGC CTCAAGCCGGCTATCAGAGCTTATGACAAGCTGATTGCTTTAGGATGTGAGCCTGGCCAG GTCACCTATGCATCAGTCATCAACGTTTACTGCCAGCTTGGGCGGAGCGACAGGGCGGAA TCGGTCTTCTCGGAGATGATCGATCGAGGCTTTGACAAGTGTGTGGTTGCATATGGTAAC ATGATCTCCATGTATGGGAAGATCAGTAGAGCGTCGGACGCGATGAGGCTGCTTGCTGTG ATGAAGAAGAAGGGGTGCGAGCCTAATATCTGGGTGTACAACTCCCTCCTGGACATGCAC GGAAGACTCGGGAATTCGAGGCAGGCTGAGAAGATCTGGAAGGAGATGATGCGCCGCAAG ATTCAGCCTGACAGGATCAGCTACACCGCGATCATCAACGCGTTCAACCGGTCAGGAGAA CTGGACCGGTGCATGGATTTGTACCAGGAGTTCAGGGAGACAGGAGGAAAGGTGGACACG GCCCTGGCTGGGCTCATGGTAGGGGTGTTCTCTAAATGCAGCCGATTCAACGAGCTCATC GAGCTTCTGAAGGATATGCAAGGCACACGACTGGACAGGAGGCTGTACCTGACCGTGTTG AGGAGCCTCCGAGACGCCGGGCTGGAGGTCCATGTGAAGTGGCTCCAAACTAATTTCAGT TTCGTGGAAGAGAAAACCTGA

Peptide Sequence

PEP ID	Os04t0583101-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29455859:29458114:1 gene:Os04g0583101 transcript:Os04t0583101-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0583101-01)
Sequence	MAKCYSEWPPLPPLHPPRRTPSQTSLWTIRRQLASFVLHCSRSCASPLLEPKNLPDEFHA VSASTPAPVPVSPLPDAPKLGISNKFIRGLCSDRQTEQLAFECYRRALHQPEFLPDKKTM NALTVQLLRAKQWSSLEFLVEDFRAYGVMPERRTCARLVASCVKARKFGLADMVLGVLEG KRGAPAAVAFSSAMQAYNKLHMYRSTLLVYERMRAARLSRDADAYRAVMAACGALGKPEM VASLLKQYKSHKWYPSESCVETYAIVCDALGRAGRASDALKCLREMEADGIAPNATIYSS IIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMHVEAGRVEKIMGVAKDMRETG LRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYCQLGRSDRAE SVFSEMIDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNIWVYNSLLDMH GRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQEFRETGGKVDT ALAGLMVGVFSKCSRFNELIELLKDMQGTRLDRRLYLTVLRSLRDAGLEVHVKWLQTNFS FVEEKT

Transcript Sequence

Transcript ID	Os04t0583101-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29455859:29458114:1 gene:Os04g0583101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0583101-01)
Sequence	AAGGTGCTCTCAACCTAGACGAGAGAGGTTCTTCCACTCCCGACCTCTAGTTTCCAGAGT GATGGCCAAATGCTACTCGGAGTGGCCTCCTCTCCCCCCTCTCCATCCACCGAGACGAAC ACCATCGCAGACCTCGCTTTGGACGATCAGGAGGCAGCTTGCGTCGTTCGTCTTGCACTG CTCCAGGTCGTGTGCTTCCCCTCTTCTTGAGCCCAAGAATTTGCCCGATGAGTTCCATGC TGTGTCTGCCTCGACGCCGGCGCCGGTGCCGGTGTCCCCGCTTCCGGATGCTCCGAAGCT CGGCATATCCAACAAGTTCATCCGGGGCCTCTGCAGCGACCGGCAGACCGAGCAGCTCGC CTTCGAGTGCTACAGGAGGGCTCTGCACCAGCCGGAGTTCCTGCCGGACAAGAAGACGAT GAACGCCCTGACCGTGCAGCTGCTCAGGGCTAAGCAGTGGAGCTCGCTGGAGTTCCTGGT TGAAGATTTCAGGGCCTATGGGGTGATGCCGGAGCGGCGGACGTGCGCGCGGCTCGTCGC GAGCTGCGTCAAGGCGAGGAAGTTCGGGCTCGCCGACATGGTGCTCGGGGTCCTCGAAGG CAAGAGGGGTGCACCTGCCGCTGTCGCCTTCAGCTCGGCGATGCAGGCGTACAACAAGCT GCACATGTACCGGAGCACGCTGCTGGTGTACGAGCGGATGAGGGCGGCTCGGTTGTCGCG CGACGCCGACGCCTACCGCGCCGTGATGGCGGCGTGCGGGGCGTTGGGCAAGCCGGAGAT GGTGGCTTCACTGCTCAAGCAGTACAAGTCCCACAAATGGTACCCCTCTGAAAGCTGTGT CGAGACATACGCCATCGTCTGCGACGCACTCGGACGAGCAGGTAGAGCCTCGGATGCGCT GAAATGCCTGCGAGAGATGGAAGCAGACGGCATCGCGCCGAATGCCACAATCTACTCTTC GATCATCAGATCTTTGGCAGATGCCCATGAATCTTCTGCAGCAGAAGACCTGTACAACGA AGCATGGAAGAAAGGGAGGCTGGGGGATCCGGACATGTTCCTGAAGGTGATCGTCATGCA TGTTGAGGCCGGGAGAGTGGAGAAGATAATGGGAGTTGCCAAGGACATGAGGGAGACTGG TCTGAGGGTCACCGATTGTATCCTATCAACCATTGTCAATGGCTTTGTGAAGAGGAGAGG CCTCAAGCCGGCTATCAGAGCTTATGACAAGCTGATTGCTTTAGGATGTGAGCCTGGCCA GGTCACCTATGCATCAGTCATCAACGTTTACTGCCAGCTTGGGCGGAGCGACAGGGCGGA ATCGGTCTTCTCGGAGATGATCGATCGAGGCTTTGACAAGTGTGTGGTTGCATATGGTAA CATGATCTCCATGTATGGGAAGATCAGTAGAGCGTCGGACGCGATGAGGCTGCTTGCTGT GATGAAGAAGAAGGGGTGCGAGCCTAATATCTGGGTGTACAACTCCCTCCTGGACATGCA CGGAAGACTCGGGAATTCGAGGCAGGCTGAGAAGATCTGGAAGGAGATGATGCGCCGCAA GATTCAGCCTGACAGGATCAGCTACACCGCGATCATCAACGCGTTCAACCGGTCAGGAGA ACTGGACCGGTGCATGGATTTGTACCAGGAGTTCAGGGAGACAGGAGGAAAGGTGGACAC GGCCCTGGCTGGGCTCATGGTAGGGGTGTTCTCTAAATGCAGCCGATTCAACGAGCTCAT CGAGCTTCTGAAGGATATGCAAGGCACACGACTGGACAGGAGGCTGTACCTGACCGTGTT GAGGAGCCTCCGAGACGCCGGGCTGGAGGTCCATGTGAAGTGGCTCCAAACTAATTTCAG TTTCGTGGAAGAGAAAACCTGATGGATCCATGAGTTATCTGTGCTGTTCATCTTCAGCAC CGAAGCATCGCGACGATCGGGTATCTGCAAAAACATTGCTCTGTACATCGACAGAAAAAA TGGGTAAATATTTGCTTGCCTCAATGCGCTTTGTCGAAACTATATGCTTATGCTGCTGGC TTCCAACCGCCATTGTAAATGTATTCTGGGAGATACACCTTTGTACCAGTAATGATCTGA TTACAGATTTATTGGATAAGTTGCATTGCTCAGTAGATCTGCATTTGCCAGATTTATTGA ACTCACTTGTAATATAGCCCTCTTCGGCAAATGTAACTTTTGCATCAGTACTGAACTTTG TACATTTCTTCAGCGCTTAACATCTTTTCGAATCTC