Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0581100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29339469:29341162:-1 gene:Os04g0581100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALICYLIC ACID 3 HYDROXYLASE description:2OG-Fe(II) oxygenase domain containing protein. (Os04t0581100-01)
Sequence	ATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTC CCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAG TCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAG GTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCAC GGGATCCCGGAGGAGGTGGTGGAAGGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATG CCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCG ACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCTTGCAT TGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAA GTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATA TCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAG CACATGGCGGTGAACTACTATCCGCCATGCCCACAGCCGGAGCTCACCTACGGCCTGCCG GGGCACAAGGACCCCAATGCCATCACGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAG GTCCAGCGCAACGGCCGCTGGGTGGCCGTCAACCCCGTGCCCGACGCCCTGGTCATCAAC ATCGGAGATCAAATCCAGGCGCTGAGCAACGACCGGTATAAGAGCGTGCTCCACCGGGTG ATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGAC GCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCGCCCTGCACCCGCTGGCGTACCGG CCCTTCAAGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGC TGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGA

Peptide Sequence

PEP ID	Os04t0581100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29339469:29341162:-1 gene:Os04g0581100 transcript:Os04t0581100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALICYLIC ACID 3 HYDROXYLASE description:2OG-Fe(II) oxygenase domain containing protein. (Os04t0581100-01)
Sequence	MAPAIAKPLLSDLVAQSGQVPSSHIRPVGDRPDLDNVDHESGAGIPVIDLKQLDGPDRRK VVEAIGSACETDGFFMVKNHGIPEEVVEGMLRVAREFFHMPESERLKCYSDDPKKAIRLS TSFNVRTEKVSNWRDFLRLHCYPLESFIDQWPSNPPSFRQVVGTYSREARALALRLLEAI SESLGLERGHMVSAMGRQAQHMAVNYYPPCPQPELTYGLPGHKDPNAITLLLQDGVSGLQ VQRNGRWVAVNPVPDALVINIGDQIQALSNDRYKSVLHRVIVNSESERISVPTFYCPSPD AVIAPAGALVDGALHPLAYRPFKYQAYYDEFWNMGLQSASCLDRFRPNDQAV

Transcript Sequence

Transcript ID	Os04t0581100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29339469:29341162:-1 gene:Os04g0581100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALICYLIC ACID 3 HYDROXYLASE description:2OG-Fe(II) oxygenase domain containing protein. (Os04t0581100-01)
Sequence	ACTAAAACCTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCA TTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTC TCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTG GCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCG ACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGT GCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAAG GGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCT ATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGA AGGTGAGCAACTGGCGCGACTTCCTGCGCTTGCATTGCTACCCTCTCGAGAGCTTCATCG ACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGG CGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGG GCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGC CATGCCCACAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCA CGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGGCCGCTGGGTGG CCGTCAACCCCGTGCCCGACGCCCTGGTCATCAACATCGGAGATCAAATCCAGGCGCTGA GCAACGACCGGTATAAGAGCGTGCTCCACCGGGTGATCGTGAACAGCGAGAGCGAGAGGA TCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGC TGGTGGACGGCGCCCTGCACCCGCTGGCGTACCGGCCCTTCAAGTACCAGGCCTACTACG ACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACG ATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCA TAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAA GGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCT AGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTG