Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0578400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29157213:29159260:1 gene:Os04g0578400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-Carotene Hydroxylase 2, carotene beta-ring hydroxylase 1 description:Similar to Beta-ring hydroxylase (Fragment). (Os04t0578400-01)
Sequence	ATGGCCACCGGTCTCTCCGGCGGCGCTATGACCAGCTTCGCCGTCAAGAAGCCGCTCCTC GCGGCCGCCGTGCGCCGCCGGTCGTGGCCCCCGCCGTCGGGCCGCGCGCTGCCGTTCTCG CCGCTCACGCGGACCCCGCGCAGCCGCGGGCTCGGGACCGTCACGTGCTTCGTGCCGCAG GGCACGGAGAGCCAGCAGGCCCCGGCTCCGTCCCCGCCGCCGACGGTGCCCGTGCCCGTG CCCTCGCTGGAGGAAGAGGCGGCTGCCGCGGCGGCGCGGCGCATCGCGGAGAGGAAGGCG CGGAAGCTGTCGGAGAGGCGGACGTACCTGGTTGCGGCCGTCATGTCCAGCCTCGGCTTC ACGTCCATGGCCGTCGCCGCCGTGTACTACCGCTTCCATTGGCAACTGGAGGGCGGGGAT GTGCCGATGACCGAGATGTTTGGCACGTTTGCGCTCTCCGTCGGCGCAGCGGTTGGGATG GAGTTCTGGGCGCAGTGGGCGCACCGCTCGCTGTGGCACGCCTCCCTGTGGCACATGCAC GAGTCGCACCACCGTGCGCGCGAGGGCCCGTTCGAGCTCAACGACGTGTTCGCCATCACC AACGCCGTGCCGGCCATCTCCCTCCTCGCCTACGGCTTCTTCCACCGGGGCATCGTCCCC GGCCTCTGCTTCGGCGCGGGCCTCGGGATTACGCTGTTCGGCATGGCCTACATGTTCGTC CACGACGGCCTGGTCCACCGCCGCTTCCCCGTCGGCCCCATCGCGAATGTGCCCTACTTC CGGCGAGTGGCCGCGGCCCACAAGATACACCACACGGACAAGTTCGAGGGCGTACCGTAT GGGCTGTTTCTTGGACCCAAGGAGCTGGAGGAGGTTGGTGGTCTGGAAGAGCTGGAGAAG GAGCTTGCGAGAATCAACCGGAGCTTGTGA

Peptide Sequence

PEP ID	Os04t0578400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29157213:29159260:1 gene:Os04g0578400 transcript:Os04t0578400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-Carotene Hydroxylase 2, carotene beta-ring hydroxylase 1 description:Similar to Beta-ring hydroxylase (Fragment). (Os04t0578400-01)
Sequence	MATGLSGGAMTSFAVKKPLLAAAVRRRSWPPPSGRALPFSPLTRTPRSRGLGTVTCFVPQ GTESQQAPAPSPPPTVPVPVPSLEEEAAAAAARRIAERKARKLSERRTYLVAAVMSSLGF TSMAVAAVYYRFHWQLEGGDVPMTEMFGTFALSVGAAVGMEFWAQWAHRSLWHASLWHMH ESHHRAREGPFELNDVFAITNAVPAISLLAYGFFHRGIVPGLCFGAGLGITLFGMAYMFV HDGLVHRRFPVGPIANVPYFRRVAAAHKIHHTDKFEGVPYGLFLGPKELEEVGGLEELEK ELARINRSL

Transcript Sequence

Transcript ID	Os04t0578400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29157213:29159260:1 gene:Os04g0578400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-Carotene Hydroxylase 2, carotene beta-ring hydroxylase 1 description:Similar to Beta-ring hydroxylase (Fragment). (Os04t0578400-01)
Sequence	GTCTCTCGATTACACTCCCCCGTCACACTCTCCCGCTCCATCCCTGTCCACGAAAGCGCG CGCGGGTAAGATACGAGGCCGGGAGGGAAGAACGACCACGGCATGGCCACCGGTCTCTCC GGCGGCGCTATGACCAGCTTCGCCGTCAAGAAGCCGCTCCTCGCGGCCGCCGTGCGCCGC CGGTCGTGGCCCCCGCCGTCGGGCCGCGCGCTGCCGTTCTCGCCGCTCACGCGGACCCCG CGCAGCCGCGGGCTCGGGACCGTCACGTGCTTCGTGCCGCAGGGCACGGAGAGCCAGCAG GCCCCGGCTCCGTCCCCGCCGCCGACGGTGCCCGTGCCCGTGCCCTCGCTGGAGGAAGAG GCGGCTGCCGCGGCGGCGCGGCGCATCGCGGAGAGGAAGGCGCGGAAGCTGTCGGAGAGG CGGACGTACCTGGTTGCGGCCGTCATGTCCAGCCTCGGCTTCACGTCCATGGCCGTCGCC GCCGTGTACTACCGCTTCCATTGGCAACTGGAGGGCGGGGATGTGCCGATGACCGAGATG TTTGGCACGTTTGCGCTCTCCGTCGGCGCAGCGGTTGGGATGGAGTTCTGGGCGCAGTGG GCGCACCGCTCGCTGTGGCACGCCTCCCTGTGGCACATGCACGAGTCGCACCACCGTGCG CGCGAGGGCCCGTTCGAGCTCAACGACGTGTTCGCCATCACCAACGCCGTGCCGGCCATC TCCCTCCTCGCCTACGGCTTCTTCCACCGGGGCATCGTCCCCGGCCTCTGCTTCGGCGCG GGCCTCGGGATTACGCTGTTCGGCATGGCCTACATGTTCGTCCACGACGGCCTGGTCCAC CGCCGCTTCCCCGTCGGCCCCATCGCGAATGTGCCCTACTTCCGGCGAGTGGCCGCGGCC CACAAGATACACCACACGGACAAGTTCGAGGGCGTACCGTATGGGCTGTTTCTTGGACCC AAGGAGCTGGAGGAGGTTGGTGGTCTGGAAGAGCTGGAGAAGGAGCTTGCGAGAATCAAC CGGAGCTTGTGATTTTGACGGCGGCAATTGCAGCTAGCAAGACTGCGCCTGTCGAGCTAG CAGAATTGCCTTTGCCTTGCAAGATTTTTTGTATTTCTGGCCGCTTCGTCGACTCCATTA ATTGTCGGTACCGGAGAGAAGGGGACTCCAGAAGCGGAAGCGCTTCGAGTATACGACGAT GTGGCAGCGGTGAAGAGCACAGTATATTTGTTTGATTGTGGCCTGTGGCATGCATGCGTC TCTGCGGCTGAACATTGTAAGGAGGATGTTCTGTGGGATGGTTATTCTTTGAATTTCACT GCGCCAACGTTTTTGGTGGAGACGTTGTGCGTCCAGTCCCCTGTCTTGTAAGAAGCACCA CATTACTGTGTATAACACATGTTAGAGATTGTTAACCACTTCAATGAAACTAAAATAGGT GGTTGGCAACAATGCTG