Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0578000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29131883:29134682:-1 gene:Os04g0578000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 2 description:ACC synthase, Ethylene biosynthesis (Os04t0578000-01)
Sequence	ATGGCGTACCAGGGCATCGACCTTCTCTCGACGAAAGCCGCAGGCGATGACCACGGCGAG AATTCATCGTACTTCGACGGGTGGAAGGCCTACGACACGAACCCGTTCGACCTGCGGCAC AATCGCGGGGGTGTCATCCAGATGGGTCTCGCCGAGAACCAGCTTTCTCTGGACCTGATC GAGGAATGGAGCAAGAACCACCCCGAGGCATCCATTTGCACACCGGAGGGCGTCTCGCAG TTCAAGAGGATCGCCAATTTCCAGGATTACCACGGCCTCCCGGAGTTCAGAAAGGCGATG GCCCAGTTTATGGGGCAGGTGAGGGGAGGCAAGGCAACGTTTGACCCCGACCGTGTCGTC ATGAGCGGCGGCGCCACCGGCGCCCAGGAGACGCTCGCCTTCTGCCTCGCCAACCCCGGC GAGGCCTTCCTCGTGCCCACGCCATACTACCCAGCTTTCGACCGCGACTGTTGCTGGAGG TCAGGAATAAAGCTGCTGCCGATCGAGTGCCACAGCTTCAACGACTTCAGGCTCACCAAG GAGGCCCTCGTGTCGGCGTACGACGGCGCACGGAGGCAGGGCATCTCCGTCAAGGGGATC CTCATCACCAACCCGTCCAACCCGCTCGGCACCATCACCGACCGCGACACGCTGGCCATG CTCGCCACCTTCGCCACCGAGCACCGCGTCCACCTCGTCTGCGACGAGATCTACGCGGGG TCGGTGTTCGCCACGCCGGAGTACGTGAGCATCGCCGAGGTCATCGAGCGCGACGTGCCG TGGTGCAACAGGGACCTGATCCACGTCGTGTACAGCCTCTCCAAGGACTTCGGCCTCCCC GGCTTCCGCGTCGGCATCATCTACTCGTACAACGACGCCGTCGTGGCGGCCGCGCGCAGG ATGTCCAGCTTCGGGCTCGTCTCGTCGCAGACGCAGTACTTCCTCGCCAGGATGCTCTCG GACGAGGAGTTCATCGGCCGCTTCCTCCAGGAGAGCAAGTGTCGGCTGGTGGCGCGGCAC GAGCGGTTCACCTCTGGCCTCCGCGAGGTCGGGATCGGCTGCCTGCGCGGCAACGCCGGG CTGTTCTCGTGGATGGACCTGCGCCGCATGCTCCGGGAGAAGACGGCCGAGGCGGAGCTG GAGCTGTGGCGGGTGATCGTACACCAGGTGAAGCTGAACGTGTCGCCCGGCACGTCGTTC CACTGCCGCGAGCCCGGGTGGTTCCGCGTCTGCCACGCCAACATGGACGACGAGACCATG GAGGTCGCGCTCGGCCGGATCCACGACTTCGTGCGCCAGCACCAGCAGCGCAGGGTCAAG GCCGAGCGCTGGGCCGCCAATAGGCAGCTCCGCCTCAGCCTGCCGCACCACCACCACCTC AGCCCAGCCCATCTCTCCAGTCCATTGGCGCTCCTGTCGCCGCAGTCCCCGATGGTTCGC GCCACCAGCTGA

Peptide Sequence

PEP ID	Os04t0578000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29131883:29134682:-1 gene:Os04g0578000 transcript:Os04t0578000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 2 description:ACC synthase, Ethylene biosynthesis (Os04t0578000-01)
Sequence	MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI EEWSKNHPEASICTPEGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVV MSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTK EALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAG SVFATPEYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARR MSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAG LFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETM EVALGRIHDFVRQHQQRRVKAERWAANRQLRLSLPHHHHLSPAHLSSPLALLSPQSPMVR ATS

Transcript Sequence

Transcript ID	Os04t0578000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29131883:29134682:-1 gene:Os04g0578000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 2 description:ACC synthase, Ethylene biosynthesis (Os04t0578000-01)
Sequence	AAACAAGCCAGCTCAATCAATCATCGAGCTAGCTGAGCTAGCTAAGTGCCATATTGCACG TACTCGTTGTCTGTCCGATCATCCTTTTTTTTTTCTTGTGGGGGTCTGTCCGATCATCCT TGCGTGGCTAGGCAGGTAGAGTAGCTACCTGCTCGGCTGCTCGCGTTCCAGCCAGGGTCC GGGCTTCGGATATCCTCGGAGTCCGACACCAAATCAATGGCGTACCAGGGCATCGACCTT CTCTCGACGAAAGCCGCAGGCGATGACCACGGCGAGAATTCATCGTACTTCGACGGGTGG AAGGCCTACGACACGAACCCGTTCGACCTGCGGCACAATCGCGGGGGTGTCATCCAGATG GGTCTCGCCGAGAACCAGCTTTCTCTGGACCTGATCGAGGAATGGAGCAAGAACCACCCC GAGGCATCCATTTGCACACCGGAGGGCGTCTCGCAGTTCAAGAGGATCGCCAATTTCCAG GATTACCACGGCCTCCCGGAGTTCAGAAAGGCGATGGCCCAGTTTATGGGGCAGGTGAGG GGAGGCAAGGCAACGTTTGACCCCGACCGTGTCGTCATGAGCGGCGGCGCCACCGGCGCC CAGGAGACGCTCGCCTTCTGCCTCGCCAACCCCGGCGAGGCCTTCCTCGTGCCCACGCCA TACTACCCAGCTTTCGACCGCGACTGTTGCTGGAGGTCAGGAATAAAGCTGCTGCCGATC GAGTGCCACAGCTTCAACGACTTCAGGCTCACCAAGGAGGCCCTCGTGTCGGCGTACGAC GGCGCACGGAGGCAGGGCATCTCCGTCAAGGGGATCCTCATCACCAACCCGTCCAACCCG CTCGGCACCATCACCGACCGCGACACGCTGGCCATGCTCGCCACCTTCGCCACCGAGCAC CGCGTCCACCTCGTCTGCGACGAGATCTACGCGGGGTCGGTGTTCGCCACGCCGGAGTAC GTGAGCATCGCCGAGGTCATCGAGCGCGACGTGCCGTGGTGCAACAGGGACCTGATCCAC GTCGTGTACAGCCTCTCCAAGGACTTCGGCCTCCCCGGCTTCCGCGTCGGCATCATCTAC TCGTACAACGACGCCGTCGTGGCGGCCGCGCGCAGGATGTCCAGCTTCGGGCTCGTCTCG TCGCAGACGCAGTACTTCCTCGCCAGGATGCTCTCGGACGAGGAGTTCATCGGCCGCTTC CTCCAGGAGAGCAAGTGTCGGCTGGTGGCGCGGCACGAGCGGTTCACCTCTGGCCTCCGC GAGGTCGGGATCGGCTGCCTGCGCGGCAACGCCGGGCTGTTCTCGTGGATGGACCTGCGC CGCATGCTCCGGGAGAAGACGGCCGAGGCGGAGCTGGAGCTGTGGCGGGTGATCGTACAC CAGGTGAAGCTGAACGTGTCGCCCGGCACGTCGTTCCACTGCCGCGAGCCCGGGTGGTTC CGCGTCTGCCACGCCAACATGGACGACGAGACCATGGAGGTCGCGCTCGGCCGGATCCAC GACTTCGTGCGCCAGCACCAGCAGCGCAGGGTCAAGGCCGAGCGCTGGGCCGCCAATAGG CAGCTCCGCCTCAGCCTGCCGCACCACCACCACCTCAGCCCAGCCCATCTCTCCAGTCCA TTGGCGCTCCTGTCGCCGCAGTCCCCGATGGTTCGCGCCACCAGCTGATTAAGCCAGCAG TGCACTTGCTCTGCTAATGCTGCGCCTTACTACGTCGACTACATTTTCATAACCATTTTT TTCTCGATCGCATCGTCGCACGGCGGCACGGGGCCGTATGGTGTTCTTTCCGATGCAGGT ACGTGTGATCGTTTGTGGAAACTAGGCTACACGTGCACGGCACCGTACATGTAGCTTGGC TTTTTTGTAGAGACGTGCGTTAGTGCGTACAGGCGTCGCCGCGTCGGGTGTACATAGGTA ATTTTAGTAGCGTGTGTAACAGGGGTATCGGAGATTCGGAGTCCTCGATTCTTTTGTGTA TGGTTTGGTTAATTCAGATGGCAAGGAATAATGATCGGATTAAGGCGTTAAGCCCCCCGA TCGGCTCTTGTAAACTGTAAAGTGTAAACACGTTACACTTACAATAAGGCTTAGGATTGA ATCGATCCGGAT