Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0576800-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:29071888:29076269:1 gene:Os04g0576800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0576800-01);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-02);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-03)
Sequence	ATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACT ACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTT CGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCA TCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCAT TTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCA TATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCAT CTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAG TATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGA CTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGA TATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATC CCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCG AGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGG TGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGC CATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGT GGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTT GGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTG ATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAA GACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAG

Peptide Sequence

PEP ID	Os04t0576800-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:29071888:29076269:1 gene:Os04g0576800 transcript:Os04t0576800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0576800-01);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-02);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-03)
Sequence	METEGWPALQPLLCLAWIATTLPIIVAALPIPAAAGGHLLRRLLSAFSSRGKTVRPSPAS SSGSSSSKAKFTVPQKYFMHFYVVGVLATTILLLAIWFYAYMKMTPLLPESSSYSTIASH LVGSNSFSFGRVHSRTMGHKYHVWRTVFVLLLMEIQVLRRLYETEHVFHYSPSARMHIVG YLTGLFYYVAAPLSLASSCIPEAAEYLQGQVAEFIVKGRARMPDLVIDSSSLLQPLLKLG WTQWIGAVIFIWGSLHQIRCHAILGTLREHKDSDEYVIPCGDWFNRVSCPHYLAELVIYF GMLVASGGEDIPVWFLFVFVITNLSFAAVETHKWYLQKFEDYPRSRYAIIPFVC

Transcript Sequence

Transcript ID	Os04t0576800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29071888:29076269:1 gene:Os04g0576800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0576800-01);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-02);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os04t0576800-03)
Sequence	CTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTC CCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGC GTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGC GCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGC CGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCA CCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACA CAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTG CCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATC GCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCAC CTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCC GCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTC ATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTC TATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCC AGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGA CACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTG AGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATT GTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCT TGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGT CGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAG TTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATC CGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATT CCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATA TATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTA TTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAG TTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGA AATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTT GATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTG TATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACAC TTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGAATTGGATTGG