Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0576500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:29042958:29046869:1 gene:Os04g0576500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain C-terminal domain containing protein. (Os04t0576500-01)
Sequence	ATGGTTTCTGTATACGAAGAAGCACGGGAAAGGTGGACTTGGAAAAATCAAGTAACAGAA GAAGGGCCTTATGGCTTTAAAATTCTCTCCCAAATAAGACGCCAGGACCATGACTGCTGT ACCTTCTCTGCTATGGCTTCAACTCTCGAGGCCAATGTAAGAGTTCAGCATGGAAGGAAC GATCAATTTTCCATACCTCACCTGCAATTTATAGATGCTCAATCAAAAATCAGTGCACCA AATACCAATGAGACAAAGGTACTGAGGCTTTTGAAAAGTCTAAAAGAGAGAGACGGTGGG GTTTACTTGGATGAAGACTATGATAGTGAGGGGAATCTCCGAGCCTTAGATGCTAAAGTT TGCAGGGTATGGAAGTTCAATCTCTACCATGTGAAGGACATTATTCATCTTCGAAGTGCT CTTCATCGGCTGCGCAGGCAAGGGCCTTTACTGGCTGTTATCCGCATCAGCCGTAATTAT GATGAGTGCCGCAAGTCAGGCCATGTCTACAAATATGATCCTGCCCGAATCTGCACATAT GATGATGGGAAACCCAAGACGCACGCGTTGTGTGTTGTTTCGTTTGTAACTGAGAAGGGT ACACCATGCCTTGAGTGTCAGGACTCTCACGGCACAGCTTGGGGTATTGGCGGTTACTTA ACTGTGGAAATCAGGTCACTAAAAGAGCTATACAGTGTTAGAGTTACGTAG

Peptide Sequence

PEP ID	Os04t0576500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:29042958:29046869:1 gene:Os04g0576500 transcript:Os04t0576500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain C-terminal domain containing protein. (Os04t0576500-01)
Sequence	MVSVYEEARERWTWKNQVTEEGPYGFKILSQIRRQDHDCCTFSAMASTLEANVRVQHGRN DQFSIPHLQFIDAQSKISAPNTNETKVLRLLKSLKERDGGVYLDEDYDSEGNLRALDAKV CRVWKFNLYHVKDIIHLRSALHRLRRQGPLLAVIRISRNYDECRKSGHVYKYDPARICTY DDGKPKTHALCVVSFVTEKGTPCLECQDSHGTAWGIGGYLTVEIRSLKELYSVRVT

Transcript Sequence

Transcript ID	Os04t0576500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:29042958:29046869:1 gene:Os04g0576500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C1A, papain C-terminal domain containing protein. (Os04t0576500-01)
Sequence	ACGGTGCGGCGGCGGGGCCAAACCCCAGATAGAACCCTGCGCCGCGTGGTGCCTAGCCCC GCGGCCGCCGCCGCCGTGGTGCTGCCCGGGGCTTGACGGCGTCGCTCCTCAGTTCCTGCC TCCGCCGACTGTTTCTTCTTCTTTGAGAGCAAGCTGGTAAAGCAAAGTAGTATACGATCT CCAGTCCAAACATCCATTCGTGTGAGCAGTCAAACAGTTAATCCTTAAGTATGGTTTCTG TATACGAAGAAGCACGGGAAAGGTGGACTTGGAAAAATCAAGTAACAGAAGAAGGGCCTT ATGGCTTTAAAATTCTCTCCCAAATAAGACGCCAGGACCATGACTGCTGTACCTTCTCTG CTATGGCTTCAACTCTCGAGGCCAATGTAAGAGTTCAGCATGGAAGGAACGATCAATTTT CCATACCTCACCTGCAATTTATAGATGCTCAATCAAAAATCAGTGCACCAAATACCAATG AGACAAAGGTACTGAGGCTTTTGAAAAGTCTAAAAGAGAGAGACGGTGGGGTTTACTTGG ATGAAGACTATGATAGTGAGGGGAATCTCCGAGCCTTAGATGCTAAAGTTTGCAGGGTAT GGAAGTTCAATCTCTACCATGTGAAGGACATTATTCATCTTCGAAGTGCTCTTCATCGGC TGCGCAGGCAAGGGCCTTTACTGGCTGTTATCCGCATCAGCCGTAATTATGATGAGTGCC GCAAGTCAGGCCATGTCTACAAATATGATCCTGCCCGAATCTGCACATATGATGATGGGA AACCCAAGACGCACGCGTTGTGTGTTGTTTCGTTTGTAACTGAGAAGGGTACACCATGCC TTGAGTGTCAGGACTCTCACGGCACAGCTTGGGGTATTGGCGGTTACTTAACTGTGGAAA TCAGGTCACTAAAAGAGCTATACAGTGTTAGAGTTACGTAGCTGGTGGCTGTCAAGTCAA TGCAACTCAAGACTCTACGTATGCACTCATTTTCTATCATTTTAATACTTCCTGCTTACA GTACGTGGCCAATGCAAAGATTTCATGGCTCAGAAGAAAGGGATCTTTGGAATTAATACT TTGTATTTAAGTGATAATGGCCTGTTGCTTCTCTTGACCTTTTGTCCCTTTTTTGGATGT GAGAGTTATGGAAGTTAGATTTGGGGAACAGAAGATTTTGTGATTCTATCAAAGCGAGAT CATTTCTTTAATTTGAATATCCACATGCCTGAGGGTATGGTTGTAGAGTGCCTGAATGCT GATATACGTGG