Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0574200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28910272:28911853:-1 gene:Os04g0574200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 description:FAS1 domain domain containing protein. (Os04t0574200-01)
Sequence	ATGGCCGCCACCGACCGCCGCCTGCTCTTCCTCCTGGCCGCCTCCCTCGCCGTCGCGGCG GTGAGCTCCCACAACATCACGGACATCCTCGACGGCTACCCGGAGTACTCGCTGTACAAC AGCTACCTCTCCCAGACCAAGGTGTGCGACGAGATCAACAGCCGGAGCACGGTCACCTGC CTCGTGCTCACCAACGGCGCCATGTCCTCCCTCGTCTCCAACCTCTCCCTCGCCGACATC AAGAACGCGCTCCGCCTCCTCACCCTCCTCGACTACTACGACACCAAGAAGCTGCACTCC CTCAGCGACGGCTCCGAGCTCACCACCACGCTGTACCAGACCACCGGCGACGCCTCCGGT AACATGGGCCACGTCAACATCACCAACCTGCGCGGCGGCAAGGTTGGGTTCGCCTCCGCC GCGCCCGGCTCCAAGTTCCAGGCCACCTACACCAAGTCCGTCAAGCAGGAGCCGTACAAC CTCTCCGTTCTTGAGGTCTCCGACCCCATCACCTTCCCCGGCCTCTTCGACTCCCCGTCG GCCGCGTCGACCAACCTCACCGCGCTTCTTGAGAAGGCCGGGTGCAAGCAGTTCGCGCGG CTCATCGTGTCGTCCGGGGTGATGAAGATGTACCAGGCGGCCATGGACAAGGCGCTGACG CTGTTCGCGCCCAACGACGACGCGTTCCAGGCCAAGGGCCTGCCGGATCTGAGCAAGCTG ACCAGCGCCGAGCTGGTGACGCTTCTGCAGTACCACGCCTTGCCGCAGTACGCGCCCAAG GCGTCGCTCAAGACCATCAAGGGCCACATCCAGACCCTGGCCTCCACCGGAGCGGGTAAG TACGACCTCTCCGTCGTCACTAAGGGCGACGACGTGTCCATGGACACCGGCATGGACAAG TCCCGCGTCGCGTCCACCGTGCTGGACGACACCCCGACGGTTATCCACACGGTGGACAGC GTGCTGCTGCCGCCAGAGCTCTTCGGTGGCGCACCTTCCCCCGCGCCGGCGCCCGGACCG GCAAGCGATGTGCCAGCCGCTTCTCCCGCGCCAGAAGGCTCCTCGCCGGCGCCCTCCCCC AAGGCGGCGGGCAAGAAGAAAAAGAAGGGCAAGTCGCCTTCCCATTCCCCACCCGCGCCT CCGGCCGACACGCCTGACATGTCGCCCGCCGACGCGCCCGCGGGAGAAGAGGCTGCAGAC AAAGCCGAGAAGAAGAACGGCGCCACCGCGGCGGCCACGAGCGTTGCGGCCACTGTGGCC TCCGCCGCCGCTCTGCTCGCCGCGTCGTTCTTGTGA

Peptide Sequence

PEP ID	Os04t0574200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28910272:28911853:-1 gene:Os04g0574200 transcript:Os04t0574200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 description:FAS1 domain domain containing protein. (Os04t0574200-01)
Sequence	MAATDRRLLFLLAASLAVAAVSSHNITDILDGYPEYSLYNSYLSQTKVCDEINSRSTVTC LVLTNGAMSSLVSNLSLADIKNALRLLTLLDYYDTKKLHSLSDGSELTTTLYQTTGDASG NMGHVNITNLRGGKVGFASAAPGSKFQATYTKSVKQEPYNLSVLEVSDPITFPGLFDSPS AASTNLTALLEKAGCKQFARLIVSSGVMKMYQAAMDKALTLFAPNDDAFQAKGLPDLSKL TSAELVTLLQYHALPQYAPKASLKTIKGHIQTLASTGAGKYDLSVVTKGDDVSMDTGMDK SRVASTVLDDTPTVIHTVDSVLLPPELFGGAPSPAPAPGPASDVPAASPAPEGSSPAPSP KAAGKKKKKGKSPSHSPPAPPADTPDMSPADAPAGEEAADKAEKKNGATAAATSVAATVA SAAALLAASFL

Transcript Sequence

Transcript ID	Os04t0574200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28910272:28911853:-1 gene:Os04g0574200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 description:FAS1 domain domain containing protein. (Os04t0574200-01)
Sequence	CTCCCCACCGTGTCACACCACACCACACAACACCACCACCGCCGCCATGGCCGCCACCGA CCGCCGCCTGCTCTTCCTCCTGGCCGCCTCCCTCGCCGTCGCGGCGGTGAGCTCCCACAA CATCACGGACATCCTCGACGGCTACCCGGAGTACTCGCTGTACAACAGCTACCTCTCCCA GACCAAGGTGTGCGACGAGATCAACAGCCGGAGCACGGTCACCTGCCTCGTGCTCACCAA CGGCGCCATGTCCTCCCTCGTCTCCAACCTCTCCCTCGCCGACATCAAGAACGCGCTCCG CCTCCTCACCCTCCTCGACTACTACGACACCAAGAAGCTGCACTCCCTCAGCGACGGCTC CGAGCTCACCACCACGCTGTACCAGACCACCGGCGACGCCTCCGGTAACATGGGCCACGT CAACATCACCAACCTGCGCGGCGGCAAGGTTGGGTTCGCCTCCGCCGCGCCCGGCTCCAA GTTCCAGGCCACCTACACCAAGTCCGTCAAGCAGGAGCCGTACAACCTCTCCGTTCTTGA GGTCTCCGACCCCATCACCTTCCCCGGCCTCTTCGACTCCCCGTCGGCCGCGTCGACCAA CCTCACCGCGCTTCTTGAGAAGGCCGGGTGCAAGCAGTTCGCGCGGCTCATCGTGTCGTC CGGGGTGATGAAGATGTACCAGGCGGCCATGGACAAGGCGCTGACGCTGTTCGCGCCCAA CGACGACGCGTTCCAGGCCAAGGGCCTGCCGGATCTGAGCAAGCTGACCAGCGCCGAGCT GGTGACGCTTCTGCAGTACCACGCCTTGCCGCAGTACGCGCCCAAGGCGTCGCTCAAGAC CATCAAGGGCCACATCCAGACCCTGGCCTCCACCGGAGCGGGTAAGTACGACCTCTCCGT CGTCACTAAGGGCGACGACGTGTCCATGGACACCGGCATGGACAAGTCCCGCGTCGCGTC CACCGTGCTGGACGACACCCCGACGGTTATCCACACGGTGGACAGCGTGCTGCTGCCGCC AGAGCTCTTCGGTGGCGCACCTTCCCCCGCGCCGGCGCCCGGACCGGCAAGCGATGTGCC AGCCGCTTCTCCCGCGCCAGAAGGCTCCTCGCCGGCGCCCTCCCCCAAGGCGGCGGGCAA GAAGAAAAAGAAGGGCAAGTCGCCTTCCCATTCCCCACCCGCGCCTCCGGCCGACACGCC TGACATGTCGCCCGCCGACGCGCCCGCGGGAGAAGAGGCTGCAGACAAAGCCGAGAAGAA GAACGGCGCCACCGCGGCGGCCACGAGCGTTGCGGCCACTGTGGCCTCCGCCGCCGCTCT GCTCGCCGCGTCGTTCTTGTGAGCGTCAGGTGTTCGACGTTGAGCTCTCGTTGTTCCCCC CTGGGCATGCATGGTGTGATGCAGTCCGGTGTTCGCTTCTGAGCTCGTGGGCTCCATGGA TAATCTCATCCTGAAGTTGTGTTCTTCTCTTCCTGGTTGGTAGTACTCGGTAGTTAGATA GGATTTGAATGATTGGATCCTCAGGTGGAGAACGGTGATTGTGATGCCTATTTTGTTAGA GCTCGGAACCATGTTTTGTTTT