Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0573200-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:28874500:28878849:1 gene:Os04g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase description:Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-01);Similar to OSIGBa0147H17.7 protein. (Os04t0573200-02);Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-03);Hypothetical gene. (Os04t0573200-04);Hypothetical gene. (Os04t0573200-05)
Sequence	CTCCGGGCCTTGACCGCCGCCTCCGCTGTGCCCGCAGCAGCCGCCGTCGCAGCCGTCGCA CTCTCCACCAACTCCTCCTCTTCCTCCAGACTCCGGCTCCCCTCGCCCGCCTCGCTCCCC TCCCTCTCCTCCGCGTACGCCGCTGCCCCGGCCTCCGGCTCCGCCCGCAAGCCGAACGCC GTGCCTCCGATGGCCGCCGCCGCCGCCACGGCCGATCTCTCTGCCGCCGCCGATAAGGGC GCCGCGCTTCCGGAGCTCATGACGGAATTCATGGTGGATATGAAATGTGATGGTTGTGTG ACAGCAGTGAAAAACAAGTTCCAAACTCTTGAAGGAATTAAAAACATTGAGGTGGACCTT AATAATCAAGTTGTTAGGGTTCTTGGATCTCTCCCAGTGAACACAATGCTGGATACTCTG CACCAAACAGGCCGAGATGCTCGTCTAATTGGGCAAGGGAACCCAAATGATTTTTTAGTA TCTGCTGCTGTAGCTGAGTTCAAAGGGCCTGTTATATTTGGTGTTGTTCGTCTGGCTCAA GTTAATATGGAATTGGCTATAGTTGAAGCCACTTTTAGTGGTCTATCACCTGGTAAACAC GGATGGTCAATAAATGAATTTGGGGATTTGACAAGAGGTGCAGAAAGTACTGGCAAAGTC TATAACCCATCGGATTATAGATCCAATAAGCCTCTTGGTGACCTGGGAACACTAGAAGCT GGAGAGAAGGGTGAAGCCCAATTTTCAGCTTCAAAAGAGAAACTGAAAGTTGTTGACTTG ATTGGCCGCTCTATTGCGTTGTATGCCACTGAGGACAGATCAGATCCTGGCATTGCAGCT GCCGTGATTGCAAGAAGCGCTGGGGTTGGCGAGAACTACAAGAAGCTGTGCACCTGTGAT GGTGTCACCATTTGGGAGTCAAGCTAA

Peptide Sequence

PEP ID	Os04t0573200-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:28874500:28878849:1 gene:Os04g0573200 transcript:Os04t0573200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase description:Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-01);Similar to OSIGBa0147H17.7 protein. (Os04t0573200-02);Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-03);Hypothetical gene. (Os04t0573200-04);Hypothetical gene. (Os04t0573200-05)
Sequence	LRALTAASAVPAAAAVAAVALSTNSSSSSRLRLPSPASLPSLSSAYAAAPASGSARKPNA VPPMAAAAATADLSAAADKGAALPELMTEFMVDMKCDGCVTAVKNKFQTLEGIKNIEVDL NNQVVRVLGSLPVNTMLDTLHQTGRDARLIGQGNPNDFLVSAAVAEFKGPVIFGVVRLAQ VNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKVYNPSDYRSNKPLGDLGTLEA GEKGEAQFSASKEKLKVVDLIGRSIALYATEDRSDPGIAAAVIARSAGVGENYKKLCTCD GVTIWESS

Transcript Sequence

Transcript ID	Os04t0573200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28874500:28878849:1 gene:Os04g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase description:Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-01);Similar to OSIGBa0147H17.7 protein. (Os04t0573200-02);Superoxide dismutase, copper/zinc binding domain containing protein. (Os04t0573200-03);Hypothetical gene. (Os04t0573200-04);Hypothetical gene. (Os04t0573200-05)
Sequence	CTCCGGGCCTTGACCGCCGCCTCCGCTGTGCCCGCAGCAGCCGCCGTCGCAGCCGTCGCA CTCTCCACCAACTCCTCCTCTTCCTCCAGACTCCGGCTCCCCTCGCCCGCCTCGCTCCCC TCCCTCTCCTCCGCGTACGCCGCTGCCCCGGCCTCCGGCTCCGCCCGCAAGCCGAACGCC GTGCCTCCGATGGCCGCCGCCGCCGCCACGGCCGATCTCTCTGCCGCCGCCGATAAGGGC GCCGCGCTTCCGGAGCTCATGACGGAATTCATGGTGGATATGAAATGTGATGGTTGTGTG ACAGCAGTGAAAAACAAGTTCCAAACTCTTGAAGGAATTAAAAACATTGAGGTGGACCTT AATAATCAAGTTGTTAGGGTTCTTGGATCTCTCCCAGTGAACACAATGCTGGATACTCTG CACCAAACAGGCCGAGATGCTCGTCTAATTGGGCAAGGGAACCCAAATGATTTTTTAGTA TCTGCTGCTGTAGCTGAGTTCAAAGGGCCTGTTATATTTGGTGTTGTTCGTCTGGCTCAA GTTAATATGGAATTGGCTATAGTTGAAGCCACTTTTAGTGGTCTATCACCTGGTAAACAC GGATGGTCAATAAATGAATTTGGGGATTTGACAAGAGGTGCAGAAAGTACTGGCAAAGTC TATAACCCATCGGATTATAGATCCAATAAGCCTCTTGGTGACCTGGGAACACTAGAAGCT GGAGAGAAGGGTGAAGCCCAATTTTCAGCTTCAAAAGAGAAACTGAAAGTTGTTGACTTG ATTGGCCGCTCTATTGCGTTGTATGCCACTGAGGACAGATCAGATCCTGGCATTGCAGCT GCCGTGATTGCAAGAAGCGCTGGGGTTGGCGAGAACTACAAGAAGCTGTGCACCTGTGAT GGTGTCACCATTTGGGAGTCAAGCTAATTTGTGTTACTAGTGAGGTTTCCATTCTACTGT TTGCTCCAATGTGTTGTACACGAAGTAATGTAGAAACAATCAACCAACTACTGAACAATT GGAATAAGCATGGATACAGTGAGGAATAAAGCTTGTTTTGGAGTGC