Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0573100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28870310:28872726:1 gene:Os04g0573100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mandelonitrile lyase-like protein. (Os04t0573100-01)
Sequence	ATGGCGTCCGACATGGACACCACACGAGCGCTGGCCATCTTAGCGGCCACAAGCTTTGTT GCAATGCTAGCATGTGTACAGGCGGCAGGAGACGAGAGCTACACGTTCATGAAGGACGCG GTGCAGTCCCCGCAGGTGTCGTACTACGACTACATCATCGTGGGCGGCGGCACGGCCGGG TGCCCGCTCGCGGCGACGCTGTCGCAGCGCTTCCGCGTGCTCCTGCTTGAGCGCGGCGGC TCGCCGTACGACGACGAGCGGATCGGGAACATGACACGCTTCGCGGACACGCTGTCCGAC ACGTCCCCCTCGTCGCCCGCGCAGCGGTTCGTGTCCGAGGACGGCGTGATCAACTCGCGC CCGCGGGTGCTGGGCGGCGGCAGCTGCATCAACGCCGGGTTCTACACGCGCGCCAGCGAC GAGTACGTGCGTGGACTCGGGTGGGACCTCGAGGCGACCACGGCGGCGTACCGGTGGGTG GAGGACGTGGTGGCGTTCCAGCCGGAGCTGGGTCCCTGGCAGTCGGCGCTGGAGAGAGGG TTGCTGGAGGCCGGGATCGCGCCGCAGAACGGCTTCACGTTCGACCACCTCGGCGGGACG AAGGTCGGCGGCTCGATCTTCGACGCCGAGGGGCGGCGCCACACGGCCGCCGACCTGCTC CGGTACGCCCGCACCGACGGCATCGACGTGCTGCTCCGAGCCAGAGTGGCCAAGATCCTG TTCAACGTCAGAGCTGGAAGACGGCCAGTGGCGCACGGGGTGGTGTTCCACGATTCCGAG GGGCAGATGCACAGGGCTTACCTCAGCAACGGCCGTGGCAACGAGATCATCCTCTCGGCG GGCGCCATGGGCAGCCCGCAGTTGCTGATGCTCAGCGGCGTCGGCCCCGCCGACCACCTC CGCTCGTTCGGCATCACGCTCGTCCTCAACCAGCCGGCCGTCGGCCAGGGCATGTCCGAC AACCCCATGAACGCCATCTACGTGCCGTCGCCTTCCCCGGTCGAGGTGTCGCTCATCCAG GTGGTCGGCATCACTGAGGTCGGGAGCTACATCGAGGGCGCCAGCGGCGCCAACTGGGGC GTCCGGCGCTCCGGCTCCGGCGGCGACAGACCGCACCGCAACTTCGGCATGTTCTCTCCA CAGACGGGGCAGCTGGCCACGGTGCCACCGAAGCAGCGGACGCCGGAGGCCATCGCGCGC GCGGCGGAGGCGATGAGCCAGCTCGACGACACGGCGTTCCGCGGCGGCTTCATCCTGGAG AAGATCCTCGGCCCGCTGTCCACGGGCCACCTCGAGCTGCGCAACCGCAACCCCGACGAC AACCCGTCGGTGACGTTCAACTACTTCGCGCACCCGGAGGACCTCCGGCGCTGCGTGGCC GGCGTGTCGGTGATCGAGCGCGTCATCAGGTCCGAGGCCTTCGCCAACTTCACGTACCCG TACTTCTCCGTCGAGACGCTGCTCAATATGACGGCGGGGTTCCCCGTCAACCTCCGGCCA CGGCACGACAACGACTCCACGTCGCTGGAGCAATTCTGCAAGGACACCGTCATGACCATC TGGCACTACCACGGCGGCTGCCAGGTGAACAGGGTCGTCGACGCCGAGTACCGCGTGATC GGCGTCGACGCGCTGCGCGTCATCGACGGCTCCACGTTCAACGCCTCGCCGGGAACCAAT CCGCAGGCCACTGTCATGATGCTCGGCAGGTACATGGGAGTCAAAATCCAAAACGAGAGG TTGGGAAATGAAGGATTAGGAAGGAGAAATCTGTAA

Peptide Sequence

PEP ID	Os04t0573100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28870310:28872726:1 gene:Os04g0573100 transcript:Os04t0573100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mandelonitrile lyase-like protein. (Os04t0573100-01)
Sequence	MASDMDTTRALAILAATSFVAMLACVQAAGDESYTFMKDAVQSPQVSYYDYIIVGGGTAG CPLAATLSQRFRVLLLERGGSPYDDERIGNMTRFADTLSDTSPSSPAQRFVSEDGVINSR PRVLGGGSCINAGFYTRASDEYVRGLGWDLEATTAAYRWVEDVVAFQPELGPWQSALERG LLEAGIAPQNGFTFDHLGGTKVGGSIFDAEGRRHTAADLLRYARTDGIDVLLRARVAKIL FNVRAGRRPVAHGVVFHDSEGQMHRAYLSNGRGNEIILSAGAMGSPQLLMLSGVGPADHL RSFGITLVLNQPAVGQGMSDNPMNAIYVPSPSPVEVSLIQVVGITEVGSYIEGASGANWG VRRSGSGGDRPHRNFGMFSPQTGQLATVPPKQRTPEAIARAAEAMSQLDDTAFRGGFILE KILGPLSTGHLELRNRNPDDNPSVTFNYFAHPEDLRRCVAGVSVIERVIRSEAFANFTYP YFSVETLLNMTAGFPVNLRPRHDNDSTSLEQFCKDTVMTIWHYHGGCQVNRVVDAEYRVI GVDALRVIDGSTFNASPGTNPQATVMMLGRYMGVKIQNERLGNEGLGRRNL

Transcript Sequence

Transcript ID	Os04t0573100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28870310:28872726:1 gene:Os04g0573100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mandelonitrile lyase-like protein. (Os04t0573100-01)
Sequence	ACACAGAAAATTAAACCGTACTCTGATACTTCCCGTGTTACGCCTGTCACAGCTTACTTA CATTGGTCGCCAATGGCGTCCGACATGGACACCACACGAGCGCTGGCCATCTTAGCGGCC ACAAGCTTTGTTGCAATGCTAGCATGTGTACAGGCGGCAGGAGACGAGAGCTACACGTTC ATGAAGGACGCGGTGCAGTCCCCGCAGGTGTCGTACTACGACTACATCATCGTGGGCGGC GGCACGGCCGGGTGCCCGCTCGCGGCGACGCTGTCGCAGCGCTTCCGCGTGCTCCTGCTT GAGCGCGGCGGCTCGCCGTACGACGACGAGCGGATCGGGAACATGACACGCTTCGCGGAC ACGCTGTCCGACACGTCCCCCTCGTCGCCCGCGCAGCGGTTCGTGTCCGAGGACGGCGTG ATCAACTCGCGCCCGCGGGTGCTGGGCGGCGGCAGCTGCATCAACGCCGGGTTCTACACG CGCGCCAGCGACGAGTACGTGCGTGGACTCGGGTGGGACCTCGAGGCGACCACGGCGGCG TACCGGTGGGTGGAGGACGTGGTGGCGTTCCAGCCGGAGCTGGGTCCCTGGCAGTCGGCG CTGGAGAGAGGGTTGCTGGAGGCCGGGATCGCGCCGCAGAACGGCTTCACGTTCGACCAC CTCGGCGGGACGAAGGTCGGCGGCTCGATCTTCGACGCCGAGGGGCGGCGCCACACGGCC GCCGACCTGCTCCGGTACGCCCGCACCGACGGCATCGACGTGCTGCTCCGAGCCAGAGTG GCCAAGATCCTGTTCAACGTCAGAGCTGGAAGACGGCCAGTGGCGCACGGGGTGGTGTTC CACGATTCCGAGGGGCAGATGCACAGGGCTTACCTCAGCAACGGCCGTGGCAACGAGATC ATCCTCTCGGCGGGCGCCATGGGCAGCCCGCAGTTGCTGATGCTCAGCGGCGTCGGCCCC GCCGACCACCTCCGCTCGTTCGGCATCACGCTCGTCCTCAACCAGCCGGCCGTCGGCCAG GGCATGTCCGACAACCCCATGAACGCCATCTACGTGCCGTCGCCTTCCCCGGTCGAGGTG TCGCTCATCCAGGTGGTCGGCATCACTGAGGTCGGGAGCTACATCGAGGGCGCCAGCGGC GCCAACTGGGGCGTCCGGCGCTCCGGCTCCGGCGGCGACAGACCGCACCGCAACTTCGGC ATGTTCTCTCCACAGACGGGGCAGCTGGCCACGGTGCCACCGAAGCAGCGGACGCCGGAG GCCATCGCGCGCGCGGCGGAGGCGATGAGCCAGCTCGACGACACGGCGTTCCGCGGCGGC TTCATCCTGGAGAAGATCCTCGGCCCGCTGTCCACGGGCCACCTCGAGCTGCGCAACCGC AACCCCGACGACAACCCGTCGGTGACGTTCAACTACTTCGCGCACCCGGAGGACCTCCGG CGCTGCGTGGCCGGCGTGTCGGTGATCGAGCGCGTCATCAGGTCCGAGGCCTTCGCCAAC TTCACGTACCCGTACTTCTCCGTCGAGACGCTGCTCAATATGACGGCGGGGTTCCCCGTC AACCTCCGGCCACGGCACGACAACGACTCCACGTCGCTGGAGCAATTCTGCAAGGACACC GTCATGACCATCTGGCACTACCACGGCGGCTGCCAGGTGAACAGGGTCGTCGACGCCGAG TACCGCGTGATCGGCGTCGACGCGCTGCGCGTCATCGACGGCTCCACGTTCAACGCCTCG CCGGGAACCAATCCGCAGGCCACTGTCATGATGCTCGGCAGGTACATGGGAGTCAAAATC CAAAACGAGAGGTTGGGAAATGAAGGATTAGGAAGGAGAAATCTGTAATTGAAGGCTTAA GTATTTGTAATGCACTATGTAATGGTTGAGTCATTGAATTTCCTGATTCTGATGCTAGTC ATGAACTAGAATTTCGCTGGGATAACATGCACATATTATTGGAAGTGTGTGCTCTTAACT TCTTATGTACTACTCAAATTCAAATGAAATTATGTTCACTCAATAAGAAACCTTTGTTCA GTTG