Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0571800-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:28788578:28791105:1 gene:Os04g0571800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-02)
Sequence

ATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCC
TTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGC
GCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGAT
CGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACA
ATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTA
AGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCAC
CTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCA
TTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCC
CCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAA
CACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATC
CGACAGTGA

Peptide Sequence

PEP ID

Os04t0571800-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:28788578:28791105:1 gene:Os04g0571800 transcript:Os04t0571800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-02)
Sequence

MLGSGLNLVSAALGFGMTAAFVAFVCARFVCCRARRADASASRPHPSPVDFDADFPSDFD
RPIEHSRSGLEPLAVAAIPTMKYNCEAFHSEDDTQCSICLSEYKEKDILRIVPICHHNFH
LYCLDAWLLKQTTCPICRISLKELPDGKSTVSSAPTMSQPPTLPESSVNPTSHFLPVHQE
HRSHQDGPDMPESVEVVIEIRQ

Transcript Sequence

Transcript ID

Os04t0571800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:28788578:28791105:1 gene:Os04g0571800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0571800-02)
Sequence

GACCGCCTCCCGTTCCCCTTCCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACG
CCGGCCGATCCGCCTCCCCAACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCT
CGGAGACACCGCACGCTCCGCCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCG
ATTCGCCGCAGCGGCGGCCGCCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCT
CCTTGTCGTGGACTCGTGGTAGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAG
GGAGGATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCG
CCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACG
CTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATT
TCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTC
CTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATAT
GTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACT
TTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGA
TCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTC
AACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATC
AAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTG
AAATCCGACAGTGACTACGGCGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTT
GTACGCCCTTCATTGCATTGTTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATG
TGGTCCCTTTGCAAGTTGTAGACTAGAGAAGTCAGTCATACAATCCACATTATCATATGT
TCTTTTTAATATATGTTGTATATTGCAAGCT