Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0571600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28772448:28774623:1 gene:Os04g0571600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os04t0571600-01)
Sequence	ATGACGACCTGCGCGGATGACCAGACGGGCTGCGCCTTCTTCGCCCCCTTGCTGTCCTCC AAGGGGGCGGAGGTCGTCATCTTGGTGGCCGGCGATGAGGCGGAGGAGCAGCAGCCGGCG CCGGTGCTGACGAGCAAGCCGCCGGGTCGGCTCGCCAAGGCGGTGAACGAAGCCTGGTCC GTTTCTTTGGGCGTCGCGTTCCCGGTGACGCCGTCCATGTTCACCTGCTCGGCACGGGGC GAGGCGCGGTCCATTCTTGGCCTCGCATTCCCGATGATACTGACGGGTTTGCTGCTCTAT CTCCGGTCGATGATCTCGATGCTATTCCTTGGTCACCTCGGCGGGCTGGCCCTCGCCGGC GGGTCCCTCGCCATCGGATTCGCCAATATTACCGGCTACTCTGTCCTCTCCGGCCTCGCC ATGGGCATGGAGCCGATATGCGGTCAGGCCTTCGGCGCGGGCAATTACGCGCTCCTGGGC GTCACCATGCAGCGGACGGTGCTCCTCCTCATCGCGGCCGCCATCCCCATAGGTGGCCTG TGGGTGCAGATGCGGCCTCTCCTCCTCTTCTGTGGCCAGGACGCCGCCATCGCGGCGGTC GCCGAGACCTACATTTTCGCGTCTCTCCCTGACCTCGTGCTCCAGGCATTCCTCCACCCG GTGAGGATATACCTCAGGACGCAATCCATCAACCTGCCCCTCACCGTGTGCGCCGGCCTG GCCATTGCCATCCACCTCCCCATCAACTACGTTCTCGTAGTCGTCCTCGGCCTCGGCGTA AAGGCGGTCGCATTGGCGTCCGTGCTGGCCAACTTGAACCTCGTGCTCTTCCTCCTCGCC TACATCTTCTTGAAAGGCGTCCACAAGCGCACCGGCGGTTTCCTTCTGTCCGCCGAGAGC TTCCGTGGCTGGGGCGAGCTCATCAGCCTCGCGCTGCCGAGCTGCGTGAGCGTCTGCCTC GAGTGGTGGTGGTACGAGATCATGATCCTGCTGTGCGGCCTGCTGCTGAACCCGCAGGCG ACGGTGGCGTCCATGGGCATACTGATCCAGACCACGTCGCTCATATACATCTTCCCTTCG TCGCTCAGCTTCGGCGTGTCCACCCGCGTGAGCAACGAGCTAGGCGCGGGGCAGCCCGAG GAGGCGAGCCGCGCAGCCACGGTGGGGCTCGTGCTCGGCTTCGGGTTCGGCGCCTTCGCC TCCGCGTTCGCGTTCCTCGTGCGCAACGTGTGGGCGAGCATGTTCACGGCCGACCCGGCC ATCGTCGCGCTCACCGCGTCCGTGCTGCCCATCCTGGGCTTGTGCGAGCTCGGCAACTGC CCGCAGACGACGGGGTGCGGGGTGCTGCGCGGCAGCGCGCGGCCCAAGGACGCCGCGAGC ATCAACCTCCGCTCCTTCTACCTCGTCGGGACGCCCGTGGCGCTCGTCATGGCATTCTGG TTCCACTTGGACTTCAGGGGCCTCTGGTTCGGTCTGCTCGCTGCGCAGGCCACCTGCACG GTGCGCATGCTGCTGGTCATCGGCCGGACGGATTGGGCGGCCGAGGCCAAGCGGTCCAAG CAGCTCACCGGAGCGGGCGCCGCCAACATGGAGAGTGACGACAGAGTTGCCGCGGACGAG AAGTCGCGCTTACCCGTCGATACGGACGTGGAGCGATCGAGCGATCACACTGATCGGTGT TGA

Peptide Sequence

PEP ID	Os04t0571600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28772448:28774623:1 gene:Os04g0571600 transcript:Os04t0571600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os04t0571600-01)
Sequence	MTTCADDQTGCAFFAPLLSSKGAEVVILVAGDEAEEQQPAPVLTSKPPGRLAKAVNEAWS VSLGVAFPVTPSMFTCSARGEARSILGLAFPMILTGLLLYLRSMISMLFLGHLGGLALAG GSLAIGFANITGYSVLSGLAMGMEPICGQAFGAGNYALLGVTMQRTVLLLIAAAIPIGGL WVQMRPLLLFCGQDAAIAAVAETYIFASLPDLVLQAFLHPVRIYLRTQSINLPLTVCAGL AIAIHLPINYVLVVVLGLGVKAVALASVLANLNLVLFLLAYIFLKGVHKRTGGFLLSAES FRGWGELISLALPSCVSVCLEWWWYEIMILLCGLLLNPQATVASMGILIQTTSLIYIFPS SLSFGVSTRVSNELGAGQPEEASRAATVGLVLGFGFGAFASAFAFLVRNVWASMFTADPA IVALTASVLPILGLCELGNCPQTTGCGVLRGSARPKDAASINLRSFYLVGTPVALVMAFW FHLDFRGLWFGLLAAQATCTVRMLLVIGRTDWAAEAKRSKQLTGAGAANMESDDRVAADE KSRLPVDTDVERSSDHTDRC

Transcript Sequence

Transcript ID	Os04t0571600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28772448:28774623:1 gene:Os04g0571600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os04t0571600-01)
Sequence	GCGCGGCTCAGAGCACACAGCTCCACCAACCTCACACGGCCTCAGGCCTCAGCCTCCAAA GGGGAGACAGGAGAGAAAGCTAACGCTTCTCTCTCTCTCTCGGTTAATTGCCTGTCTGCG TGGGAGTTACCTCCACACAGCGCCGTAAAAGCTTCGAGCGAAACCCCACGCACGTACGCA GGCACGCACACGCGCGCCGGCGGGCGGGAGAAGACCAGAGTGTTCTTCTGTTTCAGCTAT GACGACCTGCGCGGATGACCAGACGGGCTGCGCCTTCTTCGCCCCCTTGCTGTCCTCCAA GGGGGCGGAGGTCGTCATCTTGGTGGCCGGCGATGAGGCGGAGGAGCAGCAGCCGGCGCC GGTGCTGACGAGCAAGCCGCCGGGTCGGCTCGCCAAGGCGGTGAACGAAGCCTGGTCCGT TTCTTTGGGCGTCGCGTTCCCGGTGACGCCGTCCATGTTCACCTGCTCGGCACGGGGCGA GGCGCGGTCCATTCTTGGCCTCGCATTCCCGATGATACTGACGGGTTTGCTGCTCTATCT CCGGTCGATGATCTCGATGCTATTCCTTGGTCACCTCGGCGGGCTGGCCCTCGCCGGCGG GTCCCTCGCCATCGGATTCGCCAATATTACCGGCTACTCTGTCCTCTCCGGCCTCGCCAT GGGCATGGAGCCGATATGCGGTCAGGCCTTCGGCGCGGGCAATTACGCGCTCCTGGGCGT CACCATGCAGCGGACGGTGCTCCTCCTCATCGCGGCCGCCATCCCCATAGGTGGCCTGTG GGTGCAGATGCGGCCTCTCCTCCTCTTCTGTGGCCAGGACGCCGCCATCGCGGCGGTCGC CGAGACCTACATTTTCGCGTCTCTCCCTGACCTCGTGCTCCAGGCATTCCTCCACCCGGT GAGGATATACCTCAGGACGCAATCCATCAACCTGCCCCTCACCGTGTGCGCCGGCCTGGC CATTGCCATCCACCTCCCCATCAACTACGTTCTCGTAGTCGTCCTCGGCCTCGGCGTAAA GGCGGTCGCATTGGCGTCCGTGCTGGCCAACTTGAACCTCGTGCTCTTCCTCCTCGCCTA CATCTTCTTGAAAGGCGTCCACAAGCGCACCGGCGGTTTCCTTCTGTCCGCCGAGAGCTT CCGTGGCTGGGGCGAGCTCATCAGCCTCGCGCTGCCGAGCTGCGTGAGCGTCTGCCTCGA GTGGTGGTGGTACGAGATCATGATCCTGCTGTGCGGCCTGCTGCTGAACCCGCAGGCGAC GGTGGCGTCCATGGGCATACTGATCCAGACCACGTCGCTCATATACATCTTCCCTTCGTC GCTCAGCTTCGGCGTGTCCACCCGCGTGAGCAACGAGCTAGGCGCGGGGCAGCCCGAGGA GGCGAGCCGCGCAGCCACGGTGGGGCTCGTGCTCGGCTTCGGGTTCGGCGCCTTCGCCTC CGCGTTCGCGTTCCTCGTGCGCAACGTGTGGGCGAGCATGTTCACGGCCGACCCGGCCAT CGTCGCGCTCACCGCGTCCGTGCTGCCCATCCTGGGCTTGTGCGAGCTCGGCAACTGCCC GCAGACGACGGGGTGCGGGGTGCTGCGCGGCAGCGCGCGGCCCAAGGACGCCGCGAGCAT CAACCTCCGCTCCTTCTACCTCGTCGGGACGCCCGTGGCGCTCGTCATGGCATTCTGGTT CCACTTGGACTTCAGGGGCCTCTGGTTCGGTCTGCTCGCTGCGCAGGCCACCTGCACGGT GCGCATGCTGCTGGTCATCGGCCGGACGGATTGGGCGGCCGAGGCCAAGCGGTCCAAGCA GCTCACCGGAGCGGGCGCCGCCAACATGGAGAGTGACGACAGAGTTGCCGCGGACGAGAA GTCGCGCTTACCCGTCGATACGGACGTGGAGCGATCGAGCGATCACACTGATCGGTGTTG AACTGCTGACAGCAACAGCGCGAGCCGCATGCGTATTGTAGTAATCTAGCCTCTCTTTTT TTCTTTTTCTTTTTTACCATTTTTATTTCCTCCCTCTTTCCAAATTTCGGCGGGGGAGGA ATCAGATGCTGACAGAGCGACAATTTTGTTCTCGGATGCTAATTAGCAATGTAAAGATTA TGCTGATTGTTTATTAGTAGCATAGAGTTGGAGAATATGAGATACCAAGGAAAAAGATTA ATTTTGACTCTTTTCA