Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0569900-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:28663895:28665495:-1 gene:Os04g0569900 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ calmodulin-binding region domain containing protein. (Os04t0569900-01);Similar to OSIGBa0111L12.1 protein. (Os04t0569900-02)
Sequence	CGTCTTCTCATGATGGTTCTTGGTGGTGGTTGGGCATTGCAGGGGCCACCGACGCCGGAG AAGTACGACCAGGCGACTCACGAGGGCGTGCCTAAGCACGGCCGTTCTGGTTCTCTGAAG GTATTGCTCCGTTTGTTTGTTCAGATTTTTATGTGTAGTACATTGCGACAGCCTTGGAGA TTAATGGCATGGCGATTTGTGTTGCAGGGGAGCTCGTCGAAGACGCCGGGAAGTGAGAGA CTGACCCGGGAGAGGTCAGAATCTTGCGGGAGGAACTGGCTTGACAAGTGGGTGGAGGAA CGGTATTTGGATGACGAGAAGAACGCCAAGATTCTCGAGGTGGACACCGGCAAGCCTGGG CGGCACGCCTCACGGAGGCGCAGCGGCAGCCATCACCACCACTCGTCATGCTCGTCCATG ACATCCGAGCAGAAGAGCCGGAGCTACGCGACCATGCCGGAGTCTCCGTCCAAGGACTCC ACGACCGCGCAGCAGTCCGTGCCCAGCCCGCCGTCGGTGGGCATGGCCGAGGCGCTCAGC CCGCTGCTCATGGCCGTCGACATCGCCGAGCTCTGCGACAGCCCGCAGTTCTTCTCGGCG ACGTCGCGGCCGGGGAGCTCGCGGAGCAGGGCGTTCACGCCGACCAAGAGCGAGTGCTCG CGCAGCCTGTTCGGCGGCTACTCCGACTACCCGAACTACATGGCGAACACCGAGTCGTTC CGCGCCAAGGCACGCTCCCAGAGCGCGCCGAAGCAGAGGCCGCAGTACGAGAAGTCCAGC TCCCTCCGGAAGGCGTCGGCGCACGCGTTCGGACCCGGATCGTGCGCGCCGGTGGCACAG AGGACAACGGCCTCCTTGCATAGCAAGTTCACCAACAAGGCCTACCCTGGATCGGGCAGG TTGGATCGGCTAGGCATGCCCGTCAAGTACTGA

Peptide Sequence

PEP ID	Os04t0569900-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:28663895:28665495:-1 gene:Os04g0569900 transcript:Os04t0569900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ calmodulin-binding region domain containing protein. (Os04t0569900-01);Similar to OSIGBa0111L12.1 protein. (Os04t0569900-02)
Sequence	RLLMMVLGGGWALQGPPTPEKYDQATHEGVPKHGRSGSLKVLLRLFVQIFMCSTLRQPWR LMAWRFVLQGSSSKTPGSERLTRERSESCGRNWLDKWVEERYLDDEKNAKILEVDTGKPG RHASRRRSGSHHHHSSCSSMTSEQKSRSYATMPESPSKDSTTAQQSVPSPPSVGMAEALS PLLMAVDIAELCDSPQFFSATSRPGSSRSRAFTPTKSECSRSLFGGYSDYPNYMANTESF RAKARSQSAPKQRPQYEKSSSLRKASAHAFGPGSCAPVAQRTTASLHSKFTNKAYPGSGR LDRLGMPVKY

Transcript Sequence

Transcript ID	Os04t0569900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28663895:28665495:-1 gene:Os04g0569900 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ calmodulin-binding region domain containing protein. (Os04t0569900-01);Similar to OSIGBa0111L12.1 protein. (Os04t0569900-02)
Sequence	TTGTTACCACCGAGTTACTGTTCTTGGAAGCAGCTCTAGTAATGGCGGTGGTGGTTGGCA TGTCAACCTCCGGCCTGCGGTGCATGCTCCCGTTGTTACCGGGGGTCCCCTGCTGATTAA CCTCTCTGATTGTCGTTGCGCGCGTGCGTACGTAGGCGAGACGGGCACTGAAGGCGTTGC GAGGGTTGGTGAAGCTGCAGGCCCTCGTCCGCGGCAACATCGTGCGGCGGCAGGCGGCGG AGACGCTCCGGTGCATGCACGCTCTCGTCCGAGTCCAGAGGCGGGCGCGCGCGTGTCGCG CTATCCGCTCCCAGCATGTCTCGGCCCATCCCGTAAGTAAAAATTCTGTATGATTCCTGT ATTTTCACCTGTAGATACTTCAGATTAAAAAAAATGTTATGTCACAATTCTGTATTTTTC AATTTTAATGTCGTTGACGTCTTCTCATGATGGTTCTTGGTGGTGGTTGGGCATTGCAGG GGCCACCGACGCCGGAGAAGTACGACCAGGCGACTCACGAGGGCGTGCCTAAGCACGGCC GTTCTGGTTCTCTGAAGGTATTGCTCCGTTTGTTTGTTCAGATTTTTATGTGTAGTACAT TGCGACAGCCTTGGAGATTAATGGCATGGCGATTTGTGTTGCAGGGGAGCTCGTCGAAGA CGCCGGGAAGTGAGAGACTGACCCGGGAGAGGTCAGAATCTTGCGGGAGGAACTGGCTTG ACAAGTGGGTGGAGGAACGGTATTTGGATGACGAGAAGAACGCCAAGATTCTCGAGGTGG ACACCGGCAAGCCTGGGCGGCACGCCTCACGGAGGCGCAGCGGCAGCCATCACCACCACT CGTCATGCTCGTCCATGACATCCGAGCAGAAGAGCCGGAGCTACGCGACCATGCCGGAGT CTCCGTCCAAGGACTCCACGACCGCGCAGCAGTCCGTGCCCAGCCCGCCGTCGGTGGGCA TGGCCGAGGCGCTCAGCCCGCTGCTCATGGCCGTCGACATCGCCGAGCTCTGCGACAGCC CGCAGTTCTTCTCGGCGACGTCGCGGCCGGGGAGCTCGCGGAGCAGGGCGTTCACGCCGA CCAAGAGCGAGTGCTCGCGCAGCCTGTTCGGCGGCTACTCCGACTACCCGAACTACATGG CGAACACCGAGTCGTTCCGCGCCAAGGCACGCTCCCAGAGCGCGCCGAAGCAGAGGCCGC AGTACGAGAAGTCCAGCTCCCTCCGGAAGGCGTCGGCGCACGCGTTCGGACCCGGATCGT GCGCGCCGGTGGCACAGAGGACAACGGCCTCCTTGCATAGCAAGTTCACCAACAAGGCCT ACCCTGGATCGGGCAGGTTGGATCGGCTAGGCATGCCCGTCAAGTACTGATCATATGCCG GATTCTCGCGATCAACCGGGACAAGTGAATGAAAGCGACAAGTGTGTCAAACTGTGTTTA GCAAGGACCGAGTGAATTTAGCAATTGGTCGTTGTTAGGCTTGAGCTTTTTATGGGTGCT GTTACCGTCACAGATTTTCTTTCTTGTTTTTAACTAGTTATGAAGTGTAAGTTGCTGGTA GCTGTTTGGTGAAGTATCTATGCGTCCTTAACCTTCCTGAC