Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0568600-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:28573085:28573844:1 gene:Os04g0568600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 6-phospho-3-hexuloisomerase. (Os04t0568600-00)
Sequence

ATGAGCGGCGGCGGCGACGCAGCCGCCATCTGCGCCCAGATCGCGGCCGTCTTCTCCGGG
GACCCCGCCGCGCGCCCCGTCCTCGTCGCCGAGCTCGCCGCGGCGGCCGCGCGCGGGGGC
CGCGTGTTCGTGCACGGCGTCGGGCGGGAGGGCCTCATGATGCGCGCCCTCTGCATGCGC
CTCGCGCACCTCGGCCTCCCCGCGCACTGCGTCGGGGACGTCACTGCGCCGCCGGCCTCC
CCGGGGGACCTCCTCCTCGCCTCCGCCGGGCCGGGCGCGTTCTCCACCGTCGACGCCATC
TGCGGCGTGGCCCGCGGCGCCGGGGCGCACGTCGTGCTGCTCACCGCCAAGCCCGAGGGG
GACTTCCCGCGGCGCCAGGCCGACGTCGTGGCTCACCTCCCCGCGCAGACCATGGCTGAC
GACGAGGAGGCGACGACGGAGAGCTCGCCGGCGAAGGCGAAGCTGCCGATGGGGAGCCTG
TACGAGGGAGCCATGTTTGTGCTGTTCGAGATGGTGGTGCTGGAGCTCGCTCGCGTCTTG
GGCCAGAGCCCGGCCCAGATGAGGGCGCGCCACACAAACTTGGAGTAG

Peptide Sequence

PEP ID

Os04t0568600-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:28573085:28573844:1 gene:Os04g0568600 transcript:Os04t0568600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 6-phospho-3-hexuloisomerase. (Os04t0568600-00)
Sequence

MSGGGDAAAICAQIAAVFSGDPAARPVLVAELAAAAARGGRVFVHGVGREGLMMRALCMR
LAHLGLPAHCVGDVTAPPASPGDLLLASAGPGAFSTVDAICGVARGAGAHVVLLTAKPEG
DFPRRQADVVAHLPAQTMADDEEATTESSPAKAKLPMGSLYEGAMFVLFEMVVLELARVL
GQSPAQMRARHTNLE

Transcript Sequence

Transcript ID

Os04t0568600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:28573085:28573844:1 gene:Os04g0568600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 6-phospho-3-hexuloisomerase. (Os04t0568600-00)
Sequence

CCACACTCCCACTCAAACGGAGGCTCGTCATCAGCTTTGGGATAAGATAACAGAAGTCCA
CGATGAGCGGCGGCGGCGACGCAGCCGCCATCTGCGCCCAGATCGCGGCCGTCTTCTCCG
GGGACCCCGCCGCGCGCCCCGTCCTCGTCGCCGAGCTCGCCGCGGCGGCCGCGCGCGGGG
GCCGCGTGTTCGTGCACGGCGTCGGGCGGGAGGGCCTCATGATGCGCGCCCTCTGCATGC
GCCTCGCGCACCTCGGCCTCCCCGCGCACTGCGTCGGGGACGTCACTGCGCCGCCGGCCT
CCCCGGGGGACCTCCTCCTCGCCTCCGCCGGGCCGGGCGCGTTCTCCACCGTCGACGCCA
TCTGCGGCGTGGCCCGCGGCGCCGGGGCGCACGTCGTGCTGCTCACCGCCAAGCCCGAGG
GGGACTTCCCGCGGCGCCAGGCCGACGTCGTGGCTCACCTCCCCGCGCAGACCATGGCTG
ACGACGAGGAGGCGACGACGGAGAGCTCGCCGGCGAAGGCGAAGCTGCCGATGGGGAGCC
TGTACGAGGGAGCCATGTTTGTGCTGTTCGAGATGGTGGTGCTGGAGCTCGCTCGCGTCT
TGGGCCAGAGCCCGGCCCAGATGAGGGCGCGCCACACAAACTTGGAGTAGCCTAGTTTGT
GTTTTGGCCCACTTGTAACAACCTGTATGGCTGTGTTGTGCGGATTTGCAGTTGCCTGAT
AATGCTTTTTCGTCAAATTGCAAGTACATCCAACCTAATG