Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0567200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28500006:28502492:-1 gene:Os04g0567200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os04t0567200-01)
Sequence	ATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGC GCGACGGTGACGGTGGAGCGCGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGTGGGCG TGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGGCGTCCGGCCTCGCCGGGCGT GTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTC GCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGC GCCGCCATGTGGGCCGTCATGACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGT GTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCGCCGGGGCGGTCGCGCTCGGC GTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCG GTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGG TTCGACTACGGGGTGACCATCTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTAC CGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCTCCACCATCGCCATCGGCATC TTCATCTGCCTCGCCGTCTGCTTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCAC CGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGC TACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCT GCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCAAGGCGTCCGAGGACGCGCAG GCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCA CAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGC GGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCCGAGGGCGTCAATCGCCACCTCGCCGGC GCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCAGGGAGGCCTCGAGCTCCGTC GCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCC GTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGG GAGCCGGCCGCGGCGCAGCAGCTGATGGACGCCGTGCAGCTGCTCACGGTGACCTCGCTG CTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACGCCGTCGACACGCTCGCCACC CTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGACGACGAAAAGCCAACAACA GAAGCAGATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCT GCGGCTGCGGCTCGGACAACAAAGAACATTGAACAAGTTTAA

Peptide Sequence

PEP ID	Os04t0567200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28500006:28502492:-1 gene:Os04g0567200 transcript:Os04t0567200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os04t0567200-01)
Sequence	MAAVANGGAAPEWRVTVPEGATVTVEREAGRCRRAAVVWAWQLVSCVAALGSRASGLAGR VWKIGADDPRRAVHGVKVGLALALVSVFYYTRPLYDGVGGAAMWAVMTVVVVFEFTVGGC VYKGFNRATATVSAGAVALGVHWIASKSGDKLEPVVRSGSVFLLAAAATFSRFIPTVKAR FDYGVTIFILTYSLVAVSGYRVDALVAMAQQRVSTIAIGIFICLAVCLLICPVWAGQELH RLTARNMDKLAGAVEACVEGYFVAGEEEAAGPEYKRRPAAAAAAEGYKCVLNSKASEDAQ ANLARWEPAHGRFGFRHPYAQYKAVGAAMRHCAYCVEALSGCIRSAEAQSPEGVNRHLAG ASTRVATRCAAVLREASSSVAAMTTPSRGLDFAVADMNTAVQELQSEVRELPSKLAAAAG EPAAAQQLMDAVQLLTVTSLLIEVSARIEGVVDAVDTLATLAAFRSADDDDDDDDEKPTT EADAKLQTVSDHVTVEPEAAAAAARTTKNIEQV

Transcript Sequence

Transcript ID	Os04t0567200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28500006:28502492:-1 gene:Os04g0567200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os04t0567200-01)
Sequence	AAGAGCAGGAGCATCAGCTTATTACCAATCTTTTTCATTCCCCTCTCTTGGAACGTGCTG GTCTCCTCGCTTCTACACTCTCTTGATCAGCTCTCACCACTATGTACACTTGATCGTCAT TTGCCACAAGTTAAAATTGATACAGAGCAACACAAAGAGCTAAACTAGGGGCAGTAACGC GGTAGTTGTACTCGATCATATCGATCCATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCG GAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCGCGAGGCCGGCCGC TGCCGGCGGGCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGG AGCAGGGCGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGG GCGGTGCACGGCGTCAAGGTCGGCCTCGCGCTCGCCCTCGTCTCCGTGTTCTACTACACC AGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCATGACCGTCGTCGTC GTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACG GTGAGCGCCGGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAG CTCGAGCCGGTCGTCCGCAGCGGCTCGGTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCG CGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCATCTTCATCCTGACG TACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAG CGGGTCTCCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCTTGCTCATCTGC CCCGTGTGGGCCGGGCAGGAGCTGCACCGCCTCACCGCCCGCAACATGGACAAGCTCGCC GGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGAGGAGGCGGCGGGG CCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTC AACTCCAAGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGC AGGTTCGGCTTCCGCCACCCGTACGCACAGTACAAGGCCGTCGGCGCCGCCATGCGCCAC TGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGAGGCCCAGTCGCCC GAGGGCGTCAATCGCCACCTCGCCGGCGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCG GTGCTCAGGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGAC TTCGCCGTGGCGGACATGAACACCGCCGTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTC CCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCAGCTGATGGACGCC GTGCAGCTGCTCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTC GTGGACGCCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGAC GACGACGACGACGAAAAGCCAACAACAGAAGCAGATGCCAAGCTGCAAACCGTGAGCGAT CACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACATTGAA CAAGTTTAAACCGGTTCACGTCAAAATCCAACGAACGAGTCGATCGAACCGGGCAGATTA AGCCGGTTCTCGATGGGTTTCGTCACTCCCGCACCATATGCCACTTCCAAGCGGCAACCG GTCCGAGTGGCCGAGTCAGAGTGGGGAATAAAAAAGCAATCGCCGTAAAACCTTGATCAC TGTTGGTTCAGAGGAAAAGTTGACACATGCAGATAGCATCAAGGAGAAATGGGGAATAAA AAAGCTCACTTATCATAAAGTTGTCAATACGGCATTGTGGCTTTCATGCCATGAATGTAG GCACGTATAGCGTCAAATCCATGTTAGTGCGTTGTTATTTTTAATTATACCAGATAACCA GAATGTTATTTGATCTGATCCCATATAGGAGCAGGAAAGAAAGTTCAGGGCCTGTCATAT ATGGTCGTCATGCACGCACCATTTTCTTTCTCTAATCACAGTACAAAGGCTACCAGATTT TCTTGGT