Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0566500-04
CDS Infomation	cds chromosome:IRGSP-1.0:4:28426529:28435892:-1 gene:Os04g0566500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1B description:Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-01);Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-02);Similar to Argonaute protein. (Os04t0566500-03);Similar to Argonaute protein. (Os04t0566500-04)
Sequence	ATGGTGAAGAAGAAAAGAACTGGGTCTGGCAGCACCGGTGAGAGTTCTGGAGAGGCTCCA GGAGCTCCTGGCCATGGTTCTTCACAGCGAGCTGAGAGAGGTCCTCAACAGCATGGGGGA GGACGTGGTTGGGTGCCTCAACATGGTGGCCGTGGTGGTGGGCAATACCAGGGCCGTGGT GGACATTATCAGGGCCGTGGAGGGCAAGGTTCACACCATCCAGGTGGAGGGCCTCCTGAG TATCAGGGTCGTGGAGGGCCAGGTTCACATCATCCAGGTGGTGGGCCTCCTGACTATCAG GGCCGTGGAGGATCAGGTTCACATCACCCAGGTGGTGGGCCTCCCGAGTATCAACCGCGT GACTATCAAGGACGTGGTGGTCCACGCCCCAGAGGTGGAATGCCACAGCCATACTATGGC GGACCTAGGGGGAGTGGCGGACGTAGTGTTCCTTCAGGTTCATCAAGAACAGTTCCCGAG CTGCACCAAGCCCCACATGTCCAATACCAAGCCCCGATGGTTTCACCAACCCCATCGGGA GCTGGCTCATCCTCTCAGCCTGCGGCGGAGGTGAGCAGTGGACAAGTCCAACAACAGTTT CAGCAACTTGCCACCCGTGATCAAAGTTCGACCAGCCAAGCCATTCAAATAGCACCACCG TCAAGCAAATCAGTTAGATTCCCGTTGCGCCCTGGCAAGGGTACATATGGGGACAGGTGC ATTGTGAAGGCGAACCATTTCTTTGCTGAACTTCCTGATAAAGACCTTCACCAATACGAC GTATCTATTACTCCTGAGGTTACTTCACGTGGCGTGAATCGTGCTGTTATGTTTGAGTTA GTAACGCTGTATAGATATTCCCATTTGGGCGGGCGTCTACCTGCCTATGATGGAAGGAAG AGTCTTTACACAGCTGGACCATTGCCATTTGCTTCTAGGACATTTGAAATTACTCTTCAA GATGAGGAAGATAGTCTTGGTGGTGGCCAAGGCACCCAAAGGCGTGAGAGACTATTTAGG GTGGTGATCAAGTTTGCTGCCCGTGCTGATCTTCACCATTTGGCTATGTTTCTAGCTGGA AGGCAAGCAGATGCTCCTCAAGAAGCCCTTCAAGTCCTTGACATTGTGTTACGTGAATTG CCTACCACAAGGTACTCACCAGTTGGTCGGTCATTTTATTCTCCCAATTTAGGGAGACGC CAGCAACTTGGTGAGGGTTTGGAAAGTTGGCGTGGTTTTTACCAAAGCATAAGGCCTACC CAGATGGGTCTCTCACTGAATATTGATATGTCATCAACTGCATTTATTGAGCCTCTACCT GTGATTGACTTTGTTGCTCAGCTTCTGAACAGAGACATCTCAGTTAGACCATTATCTGAT TCTGATCGTGTGAAGATAAAGAAAGCTCTAAGAGGTGTGAAGGTTGAGGTGACGCATAGA GGAAACATGCGTAGAAAATATCGTATATCTGGACTCACTTCACAGGCAACAAGGGAGTTA TCATTCCCTGTCGATGATCGTGGTACTGTGAAGACTGTGGTGCAATATTTTCTGGAGACA TATGGTTTTAGTATTCAGCACACCACTTTGCCTTGCCTTCAAGTGGGCAATCAGCAAAGG CCCAATTATCTGCCTATGGAGGTTTGTAAGATCGTTGAGGGACAGCGTTACTCGAAGCGG CTTAACGAGAAACAGATTACTGCGCTATTGAAAGTGACTTGCCAGCGACCTCAAGAGCGT GAACTGGATATTTTGCGGACTGTATCTCACAATGCATACCATGAAGATCAGTATGCGCAG GAATTTGGCATAAAAATTGATGAGCGTCTTGCATCTGTTGAAGCTCGTGTTCTGCCTCCC CCAAGGCTTAAATACCATGATAGTGGGAGAGAAAAGGATGTATTGCCGAGAGTTGGCCAG TGGAACATGATGAATAAGAAAATGGTCAATGGTGGGAGAGTCAACAACTGGGCATGTATT AACTTCTCTAGAAATGTGCAAGATAGTGCTGCCAGGGGCTTCTGTCATGAGCTGGCTATC ATGTGCCAAATATCTGGAATGGATTTTGCACTGGAACCTGTGCTGCCCCCACTTACTGCT AGACCTGAACATGTGGAAAGAGCACTGAAGGCACGCTATCAAGATGCAATGAACATGCTC AGACCGCAGGGCAGGGAACTTGATTTACTGATTGTAATACTGCCTGACAATAATGGTTCT CTTTATGGGGATCTCAAAAGAATCTGTGAGACTGATCTTGGATTGGTCTCCCAATGTTGT TTGACAAAACATGTTTTTAAAATGAGCAAGCAGTATCTTGCAAATGTTGCCCTTAAAATA AACGTTAAGGTGGGGGGAAGGAATACTGTACTTGTGGATGCTTTGACAAGGAGGATTCCC CTTGTCAGTGACAGACCAACTATCATATTTGGTGCGGATGTTACTCATCCTCATCCTGGA GAAGATTCCAGTCCTTCCATTGCAGCTGTGGTTGCTTCTCAAGACTGGCCTGAAGTCACT AAGTATGCTGGATTGGTGAGTGCCCAAGCCCATCGTCAAGAATTGATACAAGATCTTTTC AAAGTATGGCAAGACCCGCATAGAGGAACTGTTACTGGTGGCATGATCAAGGAGCTTCTC ATTTCTTTCAAGAGGGCTACTGGACAGAAACCTCAGAGGATAATATTTTACAGGGATGGT GTCAGCGAGGGGCAGTTTTATCAAGTTTTGTTGTATGAGCTTGATGCCATTAGAAAGGCT TGTGCATCCCTGGAACCCAACTATCAGCCTCCAGTTACCTTTGTGGTGGTCCAGAAGCGG CATCACACAAGGTTGTTTGCTAATAATCACAACGACCAGCGTACTGTTGATAGAAGTGGA AACATTCTGCCTGGAACTGTTGTTGACTCAAAGATTTGCCATCCAACCGAGTTTGATTTC TACCTGTGTAGCCATGCTGGCATACAGGGAACAAGCCGTCCTGCTCATTATCATGTTCTG TGGGATGAGAACAAATTTACTGCAGACGAGTTGCAAACCCTCACGAACAACTTGTGCTAC ACGTATGCAAGGTGCACTCGCTCTGTATCAATTGTGCCTCCTGCGTACTATGCTCATCTG GCAGCCTTCCGAGCTCGCTTTTACATGGAGCCAGAGACATCTGACAGTGGATCAATGGCG AGTGGAGCTGCAACGAGCCGTGGCCTTCCACCAGGTGTGCGCAGCGCCAGGGTTGCTGGA AATGTAGCCGTCAGGCCTCTACCTGCTCTCAAGGAAAACGTGAAGCGTGTCATGTTTTAC TGCTAA

Peptide Sequence

PEP ID	Os04t0566500-04
PEP Infomation	pep chromosome:IRGSP-1.0:4:28426529:28435892:-1 gene:Os04g0566500 transcript:Os04t0566500-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1B description:Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-01);Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-02);Similar to Argonaute protein. (Os04t0566500-03);Similar to Argonaute protein. (Os04t0566500-04)
Sequence	MVKKKRTGSGSTGESSGEAPGAPGHGSSQRAERGPQQHGGGRGWVPQHGGRGGGQYQGRG GHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGGPPEYQPR DYQGRGGPRPRGGMPQPYYGGPRGSGGRSVPSGSSRTVPELHQAPHVQYQAPMVSPTPSG AGSSSQPAAEVSSGQVQQQFQQLATRDQSSTSQAIQIAPPSSKSVRFPLRPGKGTYGDRC IVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMFELVTLYRYSHLGGRLPAYDGRK SLYTAGPLPFASRTFEITLQDEEDSLGGGQGTQRRERLFRVVIKFAARADLHHLAMFLAG RQADAPQEALQVLDIVLRELPTTRYSPVGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPT QMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTHR GNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFLETYGFSIQHTTLPCLQVGNQQR PNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILRTVSHNAYHEDQYAQ EFGIKIDERLASVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVNNWACI NFSRNVQDSAARGFCHELAIMCQISGMDFALEPVLPPLTARPEHVERALKARYQDAMNML RPQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKI NVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVT KYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRDG VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSG NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAG NVAVRPLPALKENVKRVMFYC

Transcript Sequence

Transcript ID	Os04t0566500-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28426529:28435892:-1 gene:Os04g0566500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1B description:Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-01);Similar to Isoform 2 of Protein argonaute 1B. (Os04t0566500-02);Similar to Argonaute protein. (Os04t0566500-03);Similar to Argonaute protein. (Os04t0566500-04)
Sequence	GAGGCGGAGGCAGCAGCAGCAGTGCGGTAGTGCAAGCGCTAGTGGAGGAGTTGGGAGGAG GCCCCCTAGGGTTTCCCGAGACCGCCTCCCCCCGCGCCTGCGCCGCCGCTCGCCGAGCGC GCGCTCCGTGCCCATCATGGTGAAGAAGAAAAGAACTGGGTCTGGCAGCACCGGTGAGAG TTCTGGAGAGGCTCCAGGAGCTCCTGGCCATGGTTCTTCACAGCGAGCTGAGAGAGGTCC TCAACAGCATGGGGGAGGACGTGGTTGGGTGCCTCAACATGGTGGCCGTGGTGGTGGGCA ATACCAGGGCCGTGGTGGACATTATCAGGGCCGTGGAGGGCAAGGTTCACACCATCCAGG TGGAGGGCCTCCTGAGTATCAGGGTCGTGGAGGGCCAGGTTCACATCATCCAGGTGGTGG GCCTCCTGACTATCAGGGCCGTGGAGGATCAGGTTCACATCACCCAGGTGGTGGGCCTCC CGAGTATCAACCGCGTGACTATCAAGGACGTGGTGGTCCACGCCCCAGAGGTGGAATGCC ACAGCCATACTATGGCGGACCTAGGGGGAGTGGCGGACGTAGTGTTCCTTCAGGTTCATC AAGAACAGTTCCCGAGCTGCACCAAGCCCCACATGTCCAATACCAAGCCCCGATGGTTTC ACCAACCCCATCGGGAGCTGGCTCATCCTCTCAGCCTGCGGCGGAGGTGAGCAGTGGACA AGTCCAACAACAGTTTCAGCAACTTGCCACCCGTGATCAAAGTTCGACCAGCCAAGCCAT TCAAATAGCACCACCGTCAAGCAAATCAGTTAGATTCCCGTTGCGCCCTGGCAAGGGTAC ATATGGGGACAGGTGCATTGTGAAGGCGAACCATTTCTTTGCTGAACTTCCTGATAAAGA CCTTCACCAATACGACGTATCTATTACTCCTGAGGTTACTTCACGTGGCGTGAATCGTGC TGTTATGTTTGAGTTAGTAACGCTGTATAGATATTCCCATTTGGGCGGGCGTCTACCTGC CTATGATGGAAGGAAGAGTCTTTACACAGCTGGACCATTGCCATTTGCTTCTAGGACATT TGAAATTACTCTTCAAGATGAGGAAGATAGTCTTGGTGGTGGCCAAGGCACCCAAAGGCG TGAGAGACTATTTAGGGTGGTGATCAAGTTTGCTGCCCGTGCTGATCTTCACCATTTGGC TATGTTTCTAGCTGGAAGGCAAGCAGATGCTCCTCAAGAAGCCCTTCAAGTCCTTGACAT TGTGTTACGTGAATTGCCTACCACAAGGTACTCACCAGTTGGTCGGTCATTTTATTCTCC CAATTTAGGGAGACGCCAGCAACTTGGTGAGGGTTTGGAAAGTTGGCGTGGTTTTTACCA AAGCATAAGGCCTACCCAGATGGGTCTCTCACTGAATATTGATATGTCATCAACTGCATT TATTGAGCCTCTACCTGTGATTGACTTTGTTGCTCAGCTTCTGAACAGAGACATCTCAGT TAGACCATTATCTGATTCTGATCGTGTGAAGATAAAGAAAGCTCTAAGAGGTGTGAAGGT TGAGGTGACGCATAGAGGAAACATGCGTAGAAAATATCGTATATCTGGACTCACTTCACA GGCAACAAGGGAGTTATCATTCCCTGTCGATGATCGTGGTACTGTGAAGACTGTGGTGCA ATATTTTCTGGAGACATATGGTTTTAGTATTCAGCACACCACTTTGCCTTGCCTTCAAGT GGGCAATCAGCAAAGGCCCAATTATCTGCCTATGGAGGTTTGTAAGATCGTTGAGGGACA GCGTTACTCGAAGCGGCTTAACGAGAAACAGATTACTGCGCTATTGAAAGTGACTTGCCA GCGACCTCAAGAGCGTGAACTGGATATTTTGCGGACTGTATCTCACAATGCATACCATGA AGATCAGTATGCGCAGGAATTTGGCATAAAAATTGATGAGCGTCTTGCATCTGTTGAAGC TCGTGTTCTGCCTCCCCCAAGGCTTAAATACCATGATAGTGGGAGAGAAAAGGATGTATT GCCGAGAGTTGGCCAGTGGAACATGATGAATAAGAAAATGGTCAATGGTGGGAGAGTCAA CAACTGGGCATGTATTAACTTCTCTAGAAATGTGCAAGATAGTGCTGCCAGGGGCTTCTG TCATGAGCTGGCTATCATGTGCCAAATATCTGGAATGGATTTTGCACTGGAACCTGTGCT GCCCCCACTTACTGCTAGACCTGAACATGTGGAAAGAGCACTGAAGGCACGCTATCAAGA TGCAATGAACATGCTCAGACCGCAGGGCAGGGAACTTGATTTACTGATTGTAATACTGCC TGACAATAATGGTTCTCTTTATGGGGATCTCAAAAGAATCTGTGAGACTGATCTTGGATT GGTCTCCCAATGTTGTTTGACAAAACATGTTTTTAAAATGAGCAAGCAGTATCTTGCAAA TGTTGCCCTTAAAATAAACGTTAAGGTGGGGGGAAGGAATACTGTACTTGTGGATGCTTT GACAAGGAGGATTCCCCTTGTCAGTGACAGACCAACTATCATATTTGGTGCGGATGTTAC TCATCCTCATCCTGGAGAAGATTCCAGTCCTTCCATTGCAGCTGTGGTTGCTTCTCAAGA CTGGCCTGAAGTCACTAAGTATGCTGGATTGGTGAGTGCCCAAGCCCATCGTCAAGAATT GATACAAGATCTTTTCAAAGTATGGCAAGACCCGCATAGAGGAACTGTTACTGGTGGCAT GATCAAGGAGCTTCTCATTTCTTTCAAGAGGGCTACTGGACAGAAACCTCAGAGGATAAT ATTTTACAGGGATGGTGTCAGCGAGGGGCAGTTTTATCAAGTTTTGTTGTATGAGCTTGA TGCCATTAGAAAGGCTTGTGCATCCCTGGAACCCAACTATCAGCCTCCAGTTACCTTTGT GGTGGTCCAGAAGCGGCATCACACAAGGTTGTTTGCTAATAATCACAACGACCAGCGTAC TGTTGATAGAAGTGGAAACATTCTGCCTGGAACTGTTGTTGACTCAAAGATTTGCCATCC AACCGAGTTTGATTTCTACCTGTGTAGCCATGCTGGCATACAGGGAACAAGCCGTCCTGC TCATTATCATGTTCTGTGGGATGAGAACAAATTTACTGCAGACGAGTTGCAAACCCTCAC GAACAACTTGTGCTACACGTATGCAAGGTGCACTCGCTCTGTATCAATTGTGCCTCCTGC GTACTATGCTCATCTGGCAGCCTTCCGAGCTCGCTTTTACATGGAGCCAGAGACATCTGA CAGTGGATCAATGGCGAGTGGAGCTGCAACGAGCCGTGGCCTTCCACCAGGTGTGCGCAG CGCCAGGGTTGCTGGAAATGTAGCCGTCAGGCCTCTACCTGCTCTCAAGGAAAACGTGAA GCGTGTCATGTTTTACTGCTAAGAGCTTGGGCTGTACCCCGTATGCGCCAAGGAATGTAG TACTATGTTATGTTATTTTAGCACTTGCACTCTGTCGTTGATCCCGTTAAAACGGGTATG CTACCATAAGCTGTTGGACTATTCTGGGTATTGTAGTACTACTTGTTTTGTATTTGTGTT TGTGACGCTGCAGAGCGTGAACAACGCAAGTCTGGTACTTGTATCGTTGTGTTTGTGGGA ACCTAAATCTTGTTGGACCTTTGTTGTGCTTGAAGAACCAAGTTAAATAATCCTGTCAGT ATAGGGATTTAATTGCTGCTTGGC