Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0566100-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:28379508:28385496:1 gene:Os04g0566100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0158F05.11 protein. (Os04t0566100-00)
Sequence	ATGCGGCGAGGCTACGAGGAGATCGACGACGACGAGTGGTCGAACCACAGCTTCAAGCCT TCGCGCGTCCTCAAGCGACCAAGCCGAGGCGCCCAGCCGGACTCGCAGCCTCCCCCGCCC ATCGACTCCTTCCGTTACAACCCCAGGCCTTCCTCCTCCTCCGCCGCCGCCGCCGCCACC GCCACCGTCGTCCTCTCCGACGACGACGACGATTTCGAACTTGGTGAGGAGGAGCGGTTG CGCCGCGCCGGGAAGAGCACCCGCGTGCTCAATCGTCCGCAGCGGCAGCACAGCCCCCCT GGGCGGGCCCTTCCGCCCCGCGAGTCCTTCCGCTACAACCCTAAACCCGCCAAGGCCGCC GCCGCGGTGTCGGTTTCCGATGACGACGACGACGGCTTTGATCTCGAAGACGATGATTTC GACATCCCTTCTTCGAGGACCTCGCGTCCGCGCCGTACCGCTGGTCGGCGCTTGGCAACC GCCGTCGCCGACCTCTCGGAGGAAGACGACGATTTAGAGCTCGCTGATGATGATTTTGAC CATCCAGACCCAAGGCCAACGAGGCCGCGTCGAGCCACCGCTCGCCGTTTCGTGATTAAG GACGATGATGACAGCGACGGGGATGTGGGTGCGTCTGAGGTGGATGGGGTAGAAGCAGAG GAGGATGATGGTGTGAACTGGTCGGAGTTGGAGAATGAGGACGATGAAGATGGGGACTAT GGTGAGACGAAGGTGGAGGTGGAGGAGGGGGATGTAGTGGGTAAGGCATTGCGCAAGTGC GCGCGCATTTCGGCTGATTTGCGACAGGAGCTGTATGGCTCATCGACAAGGAATTGTGAG AGTTATGCTGAGATAGATGATTCCAGTGTCCGAATTGTTACCCAGGATGATGTGGATGCT GCATGCACAAGCGAGGAGTCGGAGTTTGAGCCTATTCTGAAGCCCTACCAGCTTGTGGGG GTCAATTTTCTTCTTCTCTTGCACCGGAAAAATATCGGTGGAGCAATTTTGGCTGATGAA ATGGGTCTTGGTAAGACAGTTCAGGCCGTGACCTATCTTACTCTGTTGCGGCATCTATAT AATGACCCAGGTCCACATCTAATAGTTTGCCCAGCTTCTGTGTTGGAAAATTGGGAAAGG GAACTTAAAAAATGGTGTCCTTCATTTTCAATCATCATGTTTCATGGTGCTGGAAGGACT GCCTACTCAAAGGAGTTGAGTTCATTGGGCAAAGCTGGTTATCCGCCTCCATTTAATGTC CTCCTTGTTTGTTACTCTCTCTTTGAGCGGCGGAGTGCTCAGCAAAAGGATGATCGCAAA GCACTCAAAAGATGGCGATGGAGTTGTGTGTTGATGGATGAAGCACATGTACTGAAAGAT AAGGGTAGCTTCCGATGGAGAAACCTTATGGCTGTCGCACAACATGCCCGCCAACGGCTA ATGCTGACAGGAACTCCCCTCCAAAATGATTTGCATGAGCTATGGTCATTGTTGGAGTTT ATGATGCCTGATATATTTGCCACTGGAGATATTGATCTGAAGAAGCTGTTAAATGCAGAA GATCATGAGCTAATTTCACGTATAAAGTCCATTTTGGGGCCATTTATTCTTAGACGTTTG AAATCAGATGTTATGCAGCAACTTGTTCCAAAGATACAACATGTTAATTTCGTAACAATG GACTCAGAGCAGTTTCAAGCTTATAACTATGCCATTGATGAATACCGTGGTGCTTGTCAA GCTCGTAGCGCAAAATCCACATCCAATTTTTCTAATAATGTTGTTGGGTTGATTCCAAAA CGACAAATATCAAACTATTTCATGCAGTTCCGTAAGATTGCGAACCATCCATTGCTTATA AGGCGCATTTACAGTGACAAAGATGTTGATCGAATTGCAAAGTTACTGTACCCTAAAGGT GCATTCGGTTTTGAATGTTCATTGGAAAGAGCAACCCAAGAACTTAGGAAGTACAATGAT TTTGCTATCCACCAACTATTAGTTTCCTATGGTGATTCTGGTACAAAGGGTGCCCTTACA GATGAGCATGTTCTTGGATCAGCAAAGTGTCAGGCCTTAGCTGAGCTTTTACCTTCCTTA GCAAATGATGGCCACAGAGTTCTCATATTCAGCCAATGGACGACAATGCTTGATATCCTT GAATGGACACTGGAAGTAATAGGAGTTACTTATAGACGTCTTGATGGGGGCACCCCAGTA ACTGAAAGGCAGACTATAGTCGACACTTTCAATAACGACCGATCTATATTTGCATGTTTG CTTTCCACAAGAGCTGGAGGCCAGGGTCTGAATTTAATAGGAGCTGATACAGTGATAATA CATGACATGGATTTCAACCCCCAGATGGATCGGCAAGCTGAAGATCGCTGCCATCGCATT GGACAACAGAAACCTGTCACTATCTATAGGCTAGTGACAAAGGGTTCGGTTGATGAAAAC ATATATGAGATAGCAAGGAGAAAGTTAGTATTAGATGCTGCAATTCTCCAGTCCGGAGCA GAGTTAGAAGATAGCACTGATGTACCTGAGAAAACAATGGGAGAAATTTTGGCATCTCTT CTCCTGGTGTGA

Peptide Sequence

PEP ID	Os04t0566100-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:28379508:28385496:1 gene:Os04g0566100 transcript:Os04t0566100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0158F05.11 protein. (Os04t0566100-00)
Sequence	MRRGYEEIDDDEWSNHSFKPSRVLKRPSRGAQPDSQPPPPIDSFRYNPRPSSSSAAAAAT ATVVLSDDDDDFELGEEERLRRAGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAA AAVSVSDDDDDGFDLEDDDFDIPSSRTSRPRRTAGRRLATAVADLSEEDDDLELADDDFD HPDPRPTRPRRATARRFVIKDDDDSDGDVGASEVDGVEAEEDDGVNWSELENEDDEDGDY GETKVEVEEGDVVGKALRKCARISADLRQELYGSSTRNCESYAEIDDSSVRIVTQDDVDA ACTSEESEFEPILKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLY NDPGPHLIVCPASVLENWERELKKWCPSFSIIMFHGAGRTAYSKELSSLGKAGYPPPFNV LLVCYSLFERRSAQQKDDRKALKRWRWSCVLMDEAHVLKDKGSFRWRNLMAVAQHARQRL MLTGTPLQNDLHELWSLLEFMMPDIFATGDIDLKKLLNAEDHELISRIKSILGPFILRRL KSDVMQQLVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSNNVVGLIPK RQISNYFMQFRKIANHPLLIRRIYSDKDVDRIAKLLYPKGAFGFECSLERATQELRKYND FAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDIL EWTLEVIGVTYRRLDGGTPVTERQTIVDTFNNDRSIFACLLSTRAGGQGLNLIGADTVII HDMDFNPQMDRQAEDRCHRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQSGA ELEDSTDVPEKTMGEILASLLLV

Transcript Sequence

Transcript ID	Os04t0566100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28379508:28385496:1 gene:Os04g0566100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0158F05.11 protein. (Os04t0566100-00)
Sequence	AGTTCTCCCACTCCTCGGAGGCCGCCCAAAATTTCCGTCCCCTCGCCTTCTCCCCCCAAA TTCTCGCGCTCCCCGACCACCGCCTCCTCGCCTCCGCCCTTGGCTCCGCCTCCTCCAAAA CCCTAGCCCACCAGCCGCCGCAGAAGCAGCCGCCGCCCCGATGCGGCGAGGCTACGAGGA GATCGACGACGACGAGTGGTCGAACCACAGCTTCAAGCCTTCGCGCGTCCTCAAGCGACC AAGCCGAGGCGCCCAGCCGGACTCGCAGCCTCCCCCGCCCATCGACTCCTTCCGTTACAA CCCCAGGCCTTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGCCACCGTCGTCCTCTCCGA CGACGACGACGATTTCGAACTTGGTGAGGAGGAGCGGTTGCGCCGCGCCGGGAAGAGCAC CCGCGTGCTCAATCGTCCGCAGCGGCAGCACAGCCCCCCTGGGCGGGCCCTTCCGCCCCG CGAGTCCTTCCGCTACAACCCTAAACCCGCCAAGGCCGCCGCCGCGGTGTCGGTTTCCGA TGACGACGACGACGGCTTTGATCTCGAAGACGATGATTTCGACATCCCTTCTTCGAGGAC CTCGCGTCCGCGCCGTACCGCTGGTCGGCGCTTGGCAACCGCCGTCGCCGACCTCTCGGA GGAAGACGACGATTTAGAGCTCGCTGATGATGATTTTGACCATCCAGACCCAAGGCCAAC GAGGCCGCGTCGAGCCACCGCTCGCCGTTTCGTGATTAAGGACGATGATGACAGCGACGG GGATGTGGGTGCGTCTGAGGTGGATGGGGTAGAAGCAGAGGAGGATGATGGTGTGAACTG GTCGGAGTTGGAGAATGAGGACGATGAAGATGGGGACTATGGTGAGACGAAGGTGGAGGT GGAGGAGGGGGATGTAGTGGGTAAGGCATTGCGCAAGTGCGCGCGCATTTCGGCTGATTT GCGACAGGAGCTGTATGGCTCATCGACAAGGAATTGTGAGAGTTATGCTGAGATAGATGA TTCCAGTGTCCGAATTGTTACCCAGGATGATGTGGATGCTGCATGCACAAGCGAGGAGTC GGAGTTTGAGCCTATTCTGAAGCCCTACCAGCTTGTGGGGGTCAATTTTCTTCTTCTCTT GCACCGGAAAAATATCGGTGGAGCAATTTTGGCTGATGAAATGGGTCTTGGTAAGACAGT TCAGGCCGTGACCTATCTTACTCTGTTGCGGCATCTATATAATGACCCAGGTCCACATCT AATAGTTTGCCCAGCTTCTGTGTTGGAAAATTGGGAAAGGGAACTTAAAAAATGGTGTCC TTCATTTTCAATCATCATGTTTCATGGTGCTGGAAGGACTGCCTACTCAAAGGAGTTGAG TTCATTGGGCAAAGCTGGTTATCCGCCTCCATTTAATGTCCTCCTTGTTTGTTACTCTCT CTTTGAGCGGCGGAGTGCTCAGCAAAAGGATGATCGCAAAGCACTCAAAAGATGGCGATG GAGTTGTGTGTTGATGGATGAAGCACATGTACTGAAAGATAAGGGTAGCTTCCGATGGAG AAACCTTATGGCTGTCGCACAACATGCCCGCCAACGGCTAATGCTGACAGGAACTCCCCT CCAAAATGATTTGCATGAGCTATGGTCATTGTTGGAGTTTATGATGCCTGATATATTTGC CACTGGAGATATTGATCTGAAGAAGCTGTTAAATGCAGAAGATCATGAGCTAATTTCACG TATAAAGTCCATTTTGGGGCCATTTATTCTTAGACGTTTGAAATCAGATGTTATGCAGCA ACTTGTTCCAAAGATACAACATGTTAATTTCGTAACAATGGACTCAGAGCAGTTTCAAGC TTATAACTATGCCATTGATGAATACCGTGGTGCTTGTCAAGCTCGTAGCGCAAAATCCAC ATCCAATTTTTCTAATAATGTTGTTGGGTTGATTCCAAAACGACAAATATCAAACTATTT CATGCAGTTCCGTAAGATTGCGAACCATCCATTGCTTATAAGGCGCATTTACAGTGACAA AGATGTTGATCGAATTGCAAAGTTACTGTACCCTAAAGGTGCATTCGGTTTTGAATGTTC ATTGGAAAGAGCAACCCAAGAACTTAGGAAGTACAATGATTTTGCTATCCACCAACTATT AGTTTCCTATGGTGATTCTGGTACAAAGGGTGCCCTTACAGATGAGCATGTTCTTGGATC AGCAAAGTGTCAGGCCTTAGCTGAGCTTTTACCTTCCTTAGCAAATGATGGCCACAGAGT TCTCATATTCAGCCAATGGACGACAATGCTTGATATCCTTGAATGGACACTGGAAGTAAT AGGAGTTACTTATAGACGTCTTGATGGGGGCACCCCAGTAACTGAAAGGCAGACTATAGT CGACACTTTCAATAACGACCGATCTATATTTGCATGTTTGCTTTCCACAAGAGCTGGAGG CCAGGGTCTGAATTTAATAGGAGCTGATACAGTGATAATACATGACATGGATTTCAACCC CCAGATGGATCGGCAAGCTGAAGATCGCTGCCATCGCATTGGACAACAGAAACCTGTCAC TATCTATAGGCTAGTGACAAAGGGTTCGGTTGATGAAAACATATATGAGATAGCAAGGAG AAAGTTAGTATTAGATGCTGCAATTCTCCAGTCCGGAGCAGAGTTAGAAGATAGCACTGA TGTACCTGAGAAAACAATGGGAGAAATTTTGGCATCTCTTCTCCTGGTGTGAGGTTCTTG TCATAGAATGCTTGAAGGTACATAATTTCACCTGAGGATATGTCTGTAACTGTCAACCTT ATTCATTCTTCATTTAAGCGAGACACTTTTGGTTGGCCGTTCTAATATGCATAGCTCAAT GGTGCCTATTTTGCACTGGATTTTGATTTATCACTGTCTGCCTCATCTACTGGTGATTCT ATGAATAAGCTTCTGTCAACTGTGCTTCAGACTCATATTTTGTTTTGAATGTGATTCAGC ATAGTGACATACTGTATAAGCTTAACATAGGTACAAATAGGTGGTAGAGAACTTTATTGT AGAAAATACTGAAACTAGAAGATTCAGAAAAATAATTATACATCTGTACTGCTGAAATTT ACAAGCTTGATATTAATGAAATG