Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0564700-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:28296439:28301777:-1 gene:Os04g0564700 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os04t0564700-01);Similar to OSIGBa0158F05.3 protein. (Os04t0564700-02)
Sequence	GACGGAAAGGCAGGGCGTTTGTATGTTAATGGATTCAGTGATCATGCATACCTATTTCAG GTCCTGATTCTGAACGAAGAGAGCGAATCACGAATTGTAAAGATGGTTTTGCCTCTCACA GAAGCCTGCCAAGGAATGGAACTTGTTTCAGGGCTTAGTGACCCAAATAAGCACAAACAA AGTGCTCTTGTTCTCTTGTTGAAATCTGGTCAAATTTGCTTATATGATGATTCAGAGATT GAGCGCTACCTTCTTCATGCTCAGTCAAGATCGCCACTAGCACTTCCAAACTATTCATCT GTGAAGCTACCTTATGGTGATCCAAGCATCACCGCTGCAAAGTTTTATACCAGTAGCCCT ACAGCTGCGACTTCTTTGGATGAGGACTATTTTTCATCATTGGCCACCAAATACCCATGG TTCCTTTCAATGAAAGATAAACATCAGACTTCCACAGGTTCTGCCGACATTCATAAGACC AGAAATCTCTATGTAACTGGACATCTTGATGGAACCATAAGGTTTTGGGATGCATCATGT CCTCTTTTACTGCAGAATTTAATGATAAAGCACCAGAATGAAGAGAATAGTCCAAGTGGC ACCCCTATTACATCATTACAGTTTGATATGTCATCCAGCATTCTAATCTGTGGGGATAGG AGTGGAACGGTCCGTATAATCACATTCAGAAAGGACTCCAGCGATAACATATTCTCCTTT TTACATGCGAAGCAAGGGGAGAGCTATAATGTCAGATGTATAAAGCTTAAAGGCGCTGTA ACCTCAATCTCTTTGATCTCGAACTCAAAGCGTGTTGCTGTTGGAACAGAAAAAGGGATT GTATCAGTTGTCAGCATTGAAGATGCATCGATCTTGTATCAAAAACAGCTTGAGTGTCGG GTATCTGGTGGAATCGCATCTTTGCAATTTGAAATGTACAGCCATAATGGCTACGACAAG GATCTTTTGCTAGTAGGAATGGAAGATTCAACTATATATATTCTTGAGGAAGAAACTGGA AAACTTTTGAATACCAACCCAGTTCAGACAAACAAACCCTCCCGAGCCCTATTGATGCAG ACACTTGAATTATCACCAGATGATCCATCGTTGTCAGATACCCACGATACAGTATCGAAA GAATCACTGTTATTGCTTTGCACTGAAAATGCAATCCGCTTATTTTCCTTGAGCCATGCA ATTCAGGGAACAAAGAATATAATCAATAAGAAGAAACCAAATGGTAGTTGCTGTTTTGCA TCTCTTATCCACAGTGTTTCTTCTGAAATTGGACTTCTACTTGTCTTCTCCAATGGCAAA ATAGAGATAAGATCCCTCCCAGATTTATCTATATTGAAGGAAGCCTCTTTAAGAGGTTTT TCATATACAAGAAACTTGAATTCTTCTAGCTCCATAGCATGTTCATCTGATGGAGAAATC ATCTTGGTTAATGGAGAGGAGACATTTTTTTTCTCTACTCTCTGTCAGAATGACATCTAC AGGCATGTAGACAGCATTAATACAATATACAGAAAAGACAACTCGCCCAGGGAAGAATCT TCTTATGTAGTGAAGTCCCCCAGAGAAAAGAAAAAGGGCATATTCGGAATGATTATGAAA GATACTAAAGCAAGCAAGGGAAAACAGAGCGATGCAAATGGAGATGAACAATTTACTGCA ACAACTTCCGAAGAGCTGTCTTCAATATTTTCATGTGCTAATTTTGCTCCAGTATCTGAG AAGAGGAACAGTTCAATAAAAGATGACGAGAACATTGAACTAGATATAGATGATATCAAC ATTGATGATAACCCGCAAAAGCAGAAAGGACCACACTTCCCAGGTCTAAGCAAACAGAAA ATCAGCAAGGGATTCCAAAGCCTAAGAGAAAAGTTGAAGCCCAGGACAGAAGAAAAGGTG AATTCAGGGAATAGAAAACCTGAAGACGACACATCAGTCAGTCAAGTTGACCAGATAAAG ATGAAATATGGATATGCAACAAATGATGACCCCACTAGCCTACCAAAAATGATTGGGAAC AAGCTGCAAGAGAATATAAAAAAGTTGGAGGGCATTAATATTCGCGCTGGAGATATGGCC AACGGTGCTCAATCCTTCTCGGCAATGGCAAAAGAACTGCTGCGAAACACAAAGAACGAG AAGGCCACATCGTAG

Peptide Sequence

PEP ID	Os04t0564700-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:28296439:28301777:-1 gene:Os04g0564700 transcript:Os04t0564700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os04t0564700-01);Similar to OSIGBa0158F05.3 protein. (Os04t0564700-02)
Sequence	DGKAGRLYVNGFSDHAYLFQVLILNEESESRIVKMVLPLTEACQGMELVSGLSDPNKHKQ SALVLLLKSGQICLYDDSEIERYLLHAQSRSPLALPNYSSVKLPYGDPSITAAKFYTSSP TAATSLDEDYFSSLATKYPWFLSMKDKHQTSTGSADIHKTRNLYVTGHLDGTIRFWDASC PLLLQNLMIKHQNEENSPSGTPITSLQFDMSSSILICGDRSGTVRIITFRKDSSDNIFSF LHAKQGESYNVRCIKLKGAVTSISLISNSKRVAVGTEKGIVSVVSIEDASILYQKQLECR VSGGIASLQFEMYSHNGYDKDLLLVGMEDSTIYILEEETGKLLNTNPVQTNKPSRALLMQ TLELSPDDPSLSDTHDTVSKESLLLLCTENAIRLFSLSHAIQGTKNIINKKKPNGSCCFA SLIHSVSSEIGLLLVFSNGKIEIRSLPDLSILKEASLRGFSYTRNLNSSSSIACSSDGEI ILVNGEETFFFSTLCQNDIYRHVDSINTIYRKDNSPREESSYVVKSPREKKKGIFGMIMK DTKASKGKQSDANGDEQFTATTSEELSSIFSCANFAPVSEKRNSSIKDDENIELDIDDIN IDDNPQKQKGPHFPGLSKQKISKGFQSLREKLKPRTEEKVNSGNRKPEDDTSVSQVDQIK MKYGYATNDDPTSLPKMIGNKLQENIKKLEGINIRAGDMANGAQSFSAMAKELLRNTKNE KATS

Transcript Sequence

Transcript ID	Os04t0564700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28296439:28301777:-1 gene:Os04g0564700 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os04t0564700-01);Similar to OSIGBa0158F05.3 protein. (Os04t0564700-02)
Sequence	GTGACGGAAAGGCAGGGCGTTTGTATGTTAATGGATTCAGTGATCATGCATACCTATTTC AGGTCCTGATTCTGAACGAAGAGAGCGAATCACGAATTGTAAAGATGGTTTTGCCTCTCA CAGAAGCCTGCCAAGGAATGGAACTTGTTTCAGGGCTTAGTGACCCAAATAAGCACAAAC AAAGTGCTCTTGTTCTCTTGTTGAAATCTGGTCAAATTTGCTTATATGATGATTCAGAGA TTGAGCGCTACCTTCTTCATGCTCAGTCAAGATCGCCACTAGCACTTCCAAACTATTCAT CTGTGAAGCTACCTTATGGTGATCCAAGCATCACCGCTGCAAAGTTTTATACCAGTAGCC CTACAGCTGCGACTTCTTTGGATGAGGACTATTTTTCATCATTGGCCACCAAATACCCAT GGTTCCTTTCAATGAAAGATAAACATCAGACTTCCACAGGTTCTGCCGACATTCATAAGA CCAGAAATCTCTATGTAACTGGACATCTTGATGGAACCATAAGGTTTTGGGATGCATCAT GTCCTCTTTTACTGCAGAATTTAATGATAAAGCACCAGAATGAAGAGAATAGTCCAAGTG GCACCCCTATTACATCATTACAGTTTGATATGTCATCCAGCATTCTAATCTGTGGGGATA GGAGTGGAACGGTCCGTATAATCACATTCAGAAAGGACTCCAGCGATAACATATTCTCCT TTTTACATGCGAAGCAAGGGGAGAGCTATAATGTCAGATGTATAAAGCTTAAAGGCGCTG TAACCTCAATCTCTTTGATCTCGAACTCAAAGCGTGTTGCTGTTGGAACAGAAAAAGGGA TTGTATCAGTTGTCAGCATTGAAGATGCATCGATCTTGTATCAAAAACAGCTTGAGTGTC GGGTATCTGGTGGAATCGCATCTTTGCAATTTGAAATGTACAGCCATAATGGCTACGACA AGGATCTTTTGCTAGTAGGAATGGAAGATTCAACTATATATATTCTTGAGGAAGAAACTG GAAAACTTTTGAATACCAACCCAGTTCAGACAAACAAACCCTCCCGAGCCCTATTGATGC AGACACTTGAATTATCACCAGATGATCCATCGTTGTCAGATACCCACGATACAGTATCGA AAGAATCACTGTTATTGCTTTGCACTGAAAATGCAATCCGCTTATTTTCCTTGAGCCATG CAATTCAGGGAACAAAGAATATAATCAATAAGAAGAAACCAAATGGTAGTTGCTGTTTTG CATCTCTTATCCACAGTGTTTCTTCTGAAATTGGACTTCTACTTGTCTTCTCCAATGGCA AAATAGAGATAAGATCCCTCCCAGATTTATCTATATTGAAGGAAGCCTCTTTAAGAGGTT TTTCATATACAAGAAACTTGAATTCTTCTAGCTCCATAGCATGTTCATCTGATGGAGAAA TCATCTTGGTTAATGGAGAGGAGACATTTTTTTTCTCTACTCTCTGTCAGAATGACATCT ACAGGCATGTAGACAGCATTAATACAATATACAGAAAAGACAACTCGCCCAGGGAAGAAT CTTCTTATGTAGTGAAGTCCCCCAGAGAAAAGAAAAAGGGCATATTCGGAATGATTATGA AAGATACTAAAGCAAGCAAGGGAAAACAGAGCGATGCAAATGGAGATGAACAATTTACTG CAACAACTTCCGAAGAGCTGTCTTCAATATTTTCATGTGCTAATTTTGCTCCAGTATCTG AGAAGAGGAACAGTTCAATAAAAGATGACGAGAACATTGAACTAGATATAGATGATATCA ACATTGATGATAACCCGCAAAAGCAGAAAGGACCACACTTCCCAGGTCTAAGCAAACAGA AAATCAGCAAGGGATTCCAAAGCCTAAGAGAAAAGTTGAAGCCCAGGACAGAAGAAAAGG TGAATTCAGGGAATAGAAAACCTGAAGACGACACATCAGTCAGTCAAGTTGACCAGATAA AGATGAAATATGGATATGCAACAAATGATGACCCCACTAGCCTACCAAAAATGATTGGGA ACAAGCTGCAAGAGAATATAAAAAAGTTGGAGGGCATTAATATTCGCGCTGGAGATATGG CCAACGGTGCTCAATCCTTCTCGGCAATGGCAAAAGAACTGCTGCGAAACACAAAGAACG AGAAGGCCACATCGTAGAAATGGCACATACATGTACCTTCCCCTCTCAGTTTTGAGTGTT CCTGTTCATTCAGTGCAGTTCTTCTACCGCATGAAATAATTCTGTTGTAAATAATGATTG AGAATCACAGCAAGAATTTACTGGTGAATTTCTTTCCCAGATGCGTTGGTAGCATGTATA GTACCACTTGATAGTCATCATAAATGAACTGTTTTTCTGTT