Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0563100-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:28192341:28195490:-1 gene:Os04g0563100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.13 protein. (Os04t0563100-00)
Sequence	ATGAGGGTCAATCTTAGGCTGCTCATGCCCCTGTTGGCGCAATACACCACGCCAACTTGG GCCACTCTGGTTGCGGGATTCTTCGTGCTGCTCTCTCTTTCCCTCTCTATATACCTTATA TTTGAGCACCTCTCAGCGTACAATAATCCAGAGGAACAAAAGTTTGTTCTCGGTGTTATC TTGATGGTCCCATGTTATGCAATTGAGTCGTATGTTTCGTTGATAAATCCAAATACCAGT GTTTACTGTGGCATCTTGCGTGATGGTTATGAAGCATTTGCTATGTACTGCTTCGGAAGG TATATTACTGCATGTTTAGGTGGGGAGGATAAAACAATAGCTTTTTTAAAGAGGGAAGGA GGCTCTGGTTCCAGGCAACCCCTCTTGGATCATGCCTCTGAGAAGGGAATCATACATCAT CATTTTCCTGTGAACTTCATATTGAAACCCTGGAGATTGGGGATGCGTTTTTACCTGATT ATCAAATTTGGAATCTTCCAATATGTGATTATAAAGACAGTCACGGCTAGCTTATCTCTT TTTCTAGAAGCTTTTGGTGTATATTGTGATGGAGAGTTCAATTTGCGATGTGGATACCCT TATTTTGCTGCAGTCCTGAACTTTAGTCAATATTGGGCCCTGTACTGTTTAGTAGAATGG TATACGGCTACCAAGGATGAATTGGCACATATAAAGCCTCTGGCTAAGTTTCTTTCTTTC AAATCAATAGTATTCTTGACATGGTGGCAAGGGGTGGTAATTGCAATAATGTATTCTTTG GGCCTACTTAGAAGTCCTTTAGCCCAGAGCTTGGAGTTGAAATCGAGCATTCAAGATTTC ATTATCTGCATAGAGATGGGCATTGCTTCCATTGTTCACCTCTATGTGTTCCCTGCGAAG CCCTATGAGCTGCAAGCCAACCAGTCACCAGGAAACGTCTCAGTACTCGGGGATTATGTA TCCTCGGACCCTGTAGATCCTTTTGAAATAAAGGAAAGTAACAGACCCGCCAAATTGAAG CTTCCGCAGTTGGAACCAGATGAGAGAAGCACAACAAACATAAAAGAAAGTGTTCGAGAC TTCGTGGTTGGCAGTGGGGAATATGTGATCAAGGATTTTAAATTCACTGTTAACCAAGCT GTACGGCCAGTCGAGAAGCGGTTTGACAAATTGATGAAAAAGAACAAGAAAAGCCAGGAT GACAACTGGGTGAGTGCAGTGTCACCAGATAGACCGGTTCGTGGAATTGATGATCCTCTG TTAGGTGGTAGCACAAGTGATAGTGGGTTCACGAAGGGCAAAAAACATCGGAGAGCTGTA AGCACGGTTGCTGCTGCGGACAGTTGGGGAGGTGGTGATTTGGCATCTGATGGCTATGAG ATAAGGGGTCGACGCTGGGCCGTAAAGAACTAA

Peptide Sequence

PEP ID	Os04t0563100-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:28192341:28195490:-1 gene:Os04g0563100 transcript:Os04t0563100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.13 protein. (Os04t0563100-00)
Sequence	MRVNLRLLMPLLAQYTTPTWATLVAGFFVLLSLSLSIYLIFEHLSAYNNPEEQKFVLGVI LMVPCYAIESYVSLINPNTSVYCGILRDGYEAFAMYCFGRYITACLGGEDKTIAFLKREG GSGSRQPLLDHASEKGIIHHHFPVNFILKPWRLGMRFYLIIKFGIFQYVIIKTVTASLSL FLEAFGVYCDGEFNLRCGYPYFAAVLNFSQYWALYCLVEWYTATKDELAHIKPLAKFLSF KSIVFLTWWQGVVIAIMYSLGLLRSPLAQSLELKSSIQDFIICIEMGIASIVHLYVFPAK PYELQANQSPGNVSVLGDYVSSDPVDPFEIKESNRPAKLKLPQLEPDERSTTNIKESVRD FVVGSGEYVIKDFKFTVNQAVRPVEKRFDKLMKKNKKSQDDNWVSAVSPDRPVRGIDDPL LGGSTSDSGFTKGKKHRRAVSTVAAADSWGGGDLASDGYEIRGRRWAVKN

Transcript Sequence

Transcript ID	Os04t0563100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28192341:28195490:-1 gene:Os04g0563100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.13 protein. (Os04t0563100-00)
Sequence	GGATCATGTGAATTTGTCAGCTTCTGATTGCTTTTTTGGGGTGAATTAGGTATTGAGTTC AACAGCTGCTATGCATATGGAGATGCCCGCAACTGTGCAGAATTTCATTTTGAATTATGC TGATTTCTGAGGTCTTGTGAGACCATAGGAATTGGAAGAAAATTTTTGCACAACCATGAG GGTCAATCTTAGGCTGCTCATGCCCCTGTTGGCGCAATACACCACGCCAACTTGGGCCAC TCTGGTTGCGGGATTCTTCGTGCTGCTCTCTCTTTCCCTCTCTATATACCTTATATTTGA GCACCTCTCAGCGTACAATAATCCAGAGGAACAAAAGTTTGTTCTCGGTGTTATCTTGAT GGTCCCATGTTATGCAATTGAGTCGTATGTTTCGTTGATAAATCCAAATACCAGTGTTTA CTGTGGCATCTTGCGTGATGGTTATGAAGCATTTGCTATGTACTGCTTCGGAAGGTATAT TACTGCATGTTTAGGTGGGGAGGATAAAACAATAGCTTTTTTAAAGAGGGAAGGAGGCTC TGGTTCCAGGCAACCCCTCTTGGATCATGCCTCTGAGAAGGGAATCATACATCATCATTT TCCTGTGAACTTCATATTGAAACCCTGGAGATTGGGGATGCGTTTTTACCTGATTATCAA ATTTGGAATCTTCCAATATGTGATTATAAAGACAGTCACGGCTAGCTTATCTCTTTTTCT AGAAGCTTTTGGTGTATATTGTGATGGAGAGTTCAATTTGCGATGTGGATACCCTTATTT TGCTGCAGTCCTGAACTTTAGTCAATATTGGGCCCTGTACTGTTTAGTAGAATGGTATAC GGCTACCAAGGATGAATTGGCACATATAAAGCCTCTGGCTAAGTTTCTTTCTTTCAAATC AATAGTATTCTTGACATGGTGGCAAGGGGTGGTAATTGCAATAATGTATTCTTTGGGCCT ACTTAGAAGTCCTTTAGCCCAGAGCTTGGAGTTGAAATCGAGCATTCAAGATTTCATTAT CTGCATAGAGATGGGCATTGCTTCCATTGTTCACCTCTATGTGTTCCCTGCGAAGCCCTA TGAGCTGCAAGCCAACCAGTCACCAGGAAACGTCTCAGTACTCGGGGATTATGTATCCTC GGACCCTGTAGATCCTTTTGAAATAAAGGAAAGTAACAGACCCGCCAAATTGAAGCTTCC GCAGTTGGAACCAGATGAGAGAAGCACAACAAACATAAAAGAAAGTGTTCGAGACTTCGT GGTTGGCAGTGGGGAATATGTGATCAAGGATTTTAAATTCACTGTTAACCAAGCTGTACG GCCAGTCGAGAAGCGGTTTGACAAATTGATGAAAAAGAACAAGAAAAGCCAGGATGACAA CTGGGTGAGTGCAGTGTCACCAGATAGACCGGTTCGTGGAATTGATGATCCTCTGTTAGG TGGTAGCACAAGTGATAGTGGGTTCACGAAGGGCAAAAAACATCGGAGAGCTGTAAGCAC GGTTGCTGCTGCGGACAGTTGGGGAGGTGGTGATTTGGCATCTGATGGCTATGAGATAAG GGGTCGACGCTGGGCCGTAAAGAACTAATAATGTTAGACATTCTGGATTGGTGCACTTGA ATCCACACTAGGTGACCTTCTGCATTACTCGCCAATTCTGGTGGTTTGCAGGATTTGCTG GTAACCTTCTGCATTACTCGCCAATTTTGTTGCTCATAAACTGGAGTAGTTCATGTTGTG CTGTATAGAACTCCTGGTACGATAGTCTCTGTGCATAGGTTATTGTTTTTATCTT