Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0563000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28181292:28185097:-1 gene:Os04g0563000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.12 protein. (Os04t0563000-01)
Sequence	GTGGCGCCGGCCGCGGCGGCGTTCACGGCGGCGGGACTGCTGCTCGTCGTCGTCGCTTTC CACTGCTTCCTGTCGCCGCCGCTCGGCGGCGGCGGCGGCGGGGGTGGCGGCCACCGTGTT GTGCGGCGACCGAACCCGCCGTTCCTGTTGAACAAGCCGAGCGAGCTGCGCCGAAATGTA GTTGGCACCGTCGATTTTGCCGTTCCTAGCGGCGGGAGCAAGCTGGGCGAAGAGCTCTGG GCGTCGAAACTGGCCAGCAACTTCTTCGGCTGCAGCAACGCGACCAAGGCGTTCGCCGAT GCCAAGGCCGTCACGGAGCCGAATCGGTATCTGATGATCGCAACGAGCGGCGGCCTGAAC CAGCAGCGAACAGGGATCATAGATGCTGTTGTTGCAGCCCGTATTCTGAATGCAACACTT GTCATTCCCAACCTGGATCAGAAATCCTTCTGGAAAGATGCAAGTGATTTTGCGGATATT TTTGATGTTGAGTCATTCATATCCTCACTCTCAAACGATGTAAAGATCATACGGCAAGTA CCTGACAGGAATGGGAAAACACCATATCCTTACAAAATGCGTATTCCTAGGAAGTGTACT GCAAAATGCTATGAGAACCGAGTATTACCTGCCCTTTTGAAAAAACATGTTGTCCAGCTT ACCAAATTTGACTACCGGGTTTCCAATAGGTTGGAGACTAACCTTCAAAAGCTTAGGTGC AGAGTCAATTATCATGCACTACAGTTCACAGATCCAATTCTTAAGATGGGCGAAATGCTT GTCCAAAGAATGAGAGCCAAAAGTGGACGCTTCATTGCCCTTCACCTAAGATTTGAGCCT GACATGCTCGCCTTCTCTGGTTGCTACTTTGGAGGTGGGGAAATTGAGAGAAGAGAACTC GGTGCAATCCGTAAGAGATGGAAGACACTGCATGCAAGCAACCCTGACAGAGAACGTAGG CACGGTAAGTGCCCTCTCACACCAGAAGAGGTTGGCCTCATGCTCCGAGCATTGGGATTT GGGAAGGATGTGCACATATATGTTGCATCAGGTGAGGTGTATGGTGGAGAGGAGACGCTG GCACCTCTGAAAGCGCTCTTCCCAAACTTCCACTCAAAGGAAACTCTAGCTAGCAAGGAG GAGTTGGCGCCTTTCCTCTCATTTTCATCTCGCATGGCAGCGCTTGATTATATTGTGTGT GATAAGAGTGATGTATTTGTGACAAATAACAACGGCAACATGGCCAGAATGTTGGCTGGT CGAAGGAGGTATTTTGGGCACAAGAGGACCATAAGGCCCAATGCCAAGAAGCTTTACTCA CTCTTTCTCAATCGAACCAGCATGAGTTGGGAAACATTTTCGTCCAAAGTTCAGACACTT CAGAAGGGATTTATGGGGGAGCCCAATGAGATAAAACCTGGAAGAGGTGAATTCCATGAG CACCCTATGGACTGTATTTGCGCAAAGACAAAGGGAAGAAGTGGGCATAGTAAGCCTCAT CCAAGTAATCGGATTGGGGAAGCAATGGAGAAACGTGCTAATGATGGTGAGTTTGACTGG AGAGATCTGGACTACGGCGAGAATACACCCTTGGGAAGGGATTCTTCAAATGAGACTGAT TCAGACATGCATGAATTGGAGGACATGGTCTCAGACTAG

Peptide Sequence

PEP ID	Os04t0563000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28181292:28185097:-1 gene:Os04g0563000 transcript:Os04t0563000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.12 protein. (Os04t0563000-01)
Sequence	VAPAAAAFTAAGLLLVVVAFHCFLSPPLGGGGGGGGGHRVVRRPNPPFLLNKPSELRRNV VGTVDFAVPSGGSKLGEELWASKLASNFFGCSNATKAFADAKAVTEPNRYLMIATSGGLN QQRTGIIDAVVAARILNATLVIPNLDQKSFWKDASDFADIFDVESFISSLSNDVKIIRQV PDRNGKTPYPYKMRIPRKCTAKCYENRVLPALLKKHVVQLTKFDYRVSNRLETNLQKLRC RVNYHALQFTDPILKMGEMLVQRMRAKSGRFIALHLRFEPDMLAFSGCYFGGGEIERREL GAIRKRWKTLHASNPDRERRHGKCPLTPEEVGLMLRALGFGKDVHIYVASGEVYGGEETL APLKALFPNFHSKETLASKEELAPFLSFSSRMAALDYIVCDKSDVFVTNNNGNMARMLAG RRRYFGHKRTIRPNAKKLYSLFLNRTSMSWETFSSKVQTLQKGFMGEPNEIKPGRGEFHE HPMDCICAKTKGRSGHSKPHPSNRIGEAMEKRANDGEFDWRDLDYGENTPLGRDSSNETD SDMHELEDMVSD

Transcript Sequence

Transcript ID	Os04t0563000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28181292:28185097:-1 gene:Os04g0563000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.12 protein. (Os04t0563000-01)
Sequence	GGTGGCGCCGGCCGCGGCGGCGTTCACGGCGGCGGGACTGCTGCTCGTCGTCGTCGCTTT CCACTGCTTCCTGTCGCCGCCGCTCGGCGGCGGCGGCGGCGGGGGTGGCGGCCACCGTGT TGTGCGGCGACCGAACCCGCCGTTCCTGTTGAACAAGCCGAGCGAGCTGCGCCGAAATGT AGTTGGCACCGTCGATTTTGCCGTTCCTAGCGGCGGGAGCAAGCTGGGCGAAGAGCTCTG GGCGTCGAAACTGGCCAGCAACTTCTTCGGCTGCAGCAACGCGACCAAGGCGTTCGCCGA TGCCAAGGCCGTCACGGAGCCGAATCGGTATCTGATGATCGCAACGAGCGGCGGCCTGAA CCAGCAGCGAACAGGGATCATAGATGCTGTTGTTGCAGCCCGTATTCTGAATGCAACACT TGTCATTCCCAACCTGGATCAGAAATCCTTCTGGAAAGATGCAAGTGATTTTGCGGATAT TTTTGATGTTGAGTCATTCATATCCTCACTCTCAAACGATGTAAAGATCATACGGCAAGT ACCTGACAGGAATGGGAAAACACCATATCCTTACAAAATGCGTATTCCTAGGAAGTGTAC TGCAAAATGCTATGAGAACCGAGTATTACCTGCCCTTTTGAAAAAACATGTTGTCCAGCT TACCAAATTTGACTACCGGGTTTCCAATAGGTTGGAGACTAACCTTCAAAAGCTTAGGTG CAGAGTCAATTATCATGCACTACAGTTCACAGATCCAATTCTTAAGATGGGCGAAATGCT TGTCCAAAGAATGAGAGCCAAAAGTGGACGCTTCATTGCCCTTCACCTAAGATTTGAGCC TGACATGCTCGCCTTCTCTGGTTGCTACTTTGGAGGTGGGGAAATTGAGAGAAGAGAACT CGGTGCAATCCGTAAGAGATGGAAGACACTGCATGCAAGCAACCCTGACAGAGAACGTAG GCACGGTAAGTGCCCTCTCACACCAGAAGAGGTTGGCCTCATGCTCCGAGCATTGGGATT TGGGAAGGATGTGCACATATATGTTGCATCAGGTGAGGTGTATGGTGGAGAGGAGACGCT GGCACCTCTGAAAGCGCTCTTCCCAAACTTCCACTCAAAGGAAACTCTAGCTAGCAAGGA GGAGTTGGCGCCTTTCCTCTCATTTTCATCTCGCATGGCAGCGCTTGATTATATTGTGTG TGATAAGAGTGATGTATTTGTGACAAATAACAACGGCAACATGGCCAGAATGTTGGCTGG TCGAAGGAGGTATTTTGGGCACAAGAGGACCATAAGGCCCAATGCCAAGAAGCTTTACTC ACTCTTTCTCAATCGAACCAGCATGAGTTGGGAAACATTTTCGTCCAAAGTTCAGACACT TCAGAAGGGATTTATGGGGGAGCCCAATGAGATAAAACCTGGAAGAGGTGAATTCCATGA GCACCCTATGGACTGTATTTGCGCAAAGACAAAGGGAAGAAGTGGGCATAGTAAGCCTCA TCCAAGTAATCGGATTGGGGAAGCAATGGAGAAACGTGCTAATGATGGTGAGTTTGACTG GAGAGATCTGGACTACGGCGAGAATACACCCTTGGGAAGGGATTCTTCAAATGAGACTGA TTCAGACATGCATGAATTGGAGGACATGGTCTCAGACTAGACATGTAAAATGGATAGTAT CAGAATTAGGTTTTTCAGCTAAACTGGATTGCTGGTGAAGTTTTTAGCAGAGAGAAGCTG CAGCGTAATTTATATTCTCCGTTTTTTTATGGAGACTTGTAGAAATCAGTGTGGGCTTCT TACAGAGAACACAGAAACAGACCTTCGGTATGCGCAAAGAAAATTGTACAGTGCTGTGTT AGTTTCCTGCGAATGCTGAGAGGCAAAGAAGACTTTTTAGTTCCTTTTTTACTCTTTCAA ATATTTTACCTGTGTACCATAAATAGATGCTATAGTATTATTTTGGTTTTTTTTTGTCCT TTGGTATGCGTTTTCTTATTACCCTTGTTTTTTCTTTCTTTCAACAAGTGGATGTAACTT TTAGGTTTTTTGCTCCCGTGAAATTTGTACATAGCATGACACCTAAATGAAAGGG