Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0561700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:28117990:28122646:-1 gene:Os04g0561700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.2 protein. (Os04t0561700-01)
Sequence

ATGGCGGCCGCAGCGGAGGTGGATGCGGAGGCGAGGAGCATCCTCGAACGCGCAGCGGCG
TCCTCCTTCCCACCGCTCCACGCCATCCACCACCTCCTCTCCGTCGGGGTCTGTGTGCGG
TGCATCTTTCGGTTCTTTGGAGCCTTTAGTTATGCAGCACCATGCCTTTCTCTTACGGCA
TCAGTTCTGCATTCGTTTCTTGAAGAGCATGACGATTCCGCAAAAAGTGGGTCTTGTTCA
TGTTTGTCAAAAGATGAGGCGTACTGCTCTATTTGCTTTGGAGTGTTACTGCCCACCTGC
TATCAAGATGATGGTGTAGAACCACTCCGTAGTGTTTCTCCTATCGATAATGTTACTTCA
ATTATATCTGAAGCAGTCCAGAGAGAGGGTCACCAAGTCGATGAGTTCTCCCTAGAAATT
TCACTGCCTGCAGTTATAGCAGCTAATGATCGTGCCATTAGGTTATATATGAAAGAGAAA
TATGGCAGTGCAAATTGGTTCGATGAAAAAATATTTTCTCAACAGACAATGTCAGTGAAG
GAGGCCTTGAGAATATTGCTAGTACCGTCAGTAGAAAAACAAATGAATGTGAAACATGGT
AATAATTCATTTCGAATTCGCTTAACTTATACTCATGATGAAGGTTCACAAAAGCTTCTA
AGGCTTCTGCCAAATGACCGTGGTCGTAAAAGAAAAACAGAATCAAGAGATGGAAGCAGT
AAAAGGGGCTCAACAGATGATGATAAACAAATATTAAGTGAATCAGATGCATTCATCAAC
AAGAACCTTGAAGGCATTCAAGATCAAGACTTCCGTAGTTTATTTCAATTGCCACCTGAA
AAGGTGTTAGAACCCTGCCATCTTGTGATATCTTGCCAACGGTCACCCATATATATTGGT
GGAAGATACTTGAAGCTTTCAAGGAATGTCAGCCAGTCATGTTGGATAATTGATGATGAG
AGAATGGGGGAAGCATCAGTTGAGGAGATAATTGGGGAGAATGTCCGTGCCATCTGCAAA
GGTGATGGCTATAAGTTCCATGCTGCTGGAAGAGAAGATATTGATGTTCGGATGCTTGGA
TCTGGTCGTCCATTCTTAGTTGAAGTCTTGAATGTGCGATCTATTCCATCTGCTACTGAA
GTTCAACAAATAGCAGATAAGATTAATGACTCTGAAAAGAAACATGTCAGGGTTAGAAAT
CTCAAGCTGGTAGGCAGTGAAATATGGACAATGATGCGGGAAGGAGAAGCAGAGAAGCAG
AAGCAGTATGCTGCCCTCATATGGACGTCTCGCCCTCTGACGGATGATGACCTACATAAT
ATTTCTCTTATCAAAGATATGGAAATTGTACAAAAGACGCCAATAAGAGTCTTACATCGT
AGAAGTCCATTAGAGAGAAAACGGATTATACACTGGATGGAGATTGAAAAAATTTCTGGC
GGGTCAAACTATTACCTGTTGCATCTATGCACTCAAGCTGGGACATACATAAAGGAGTTT
GTGCACGGAGATCTTGGACGCACACACCCAAGTGTTGGCGTCATGTTAAGCTGCAGAGCT
GAGATACTGCAACTCGATGTCACTGACGTTAAGATGGACTTCCTGCAGTAA

Peptide Sequence

PEP ID

Os04t0561700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:28117990:28122646:-1 gene:Os04g0561700 transcript:Os04t0561700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.2 protein. (Os04t0561700-01)
Sequence

MAAAAEVDAEARSILERAAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSLTA
SVLHSFLEEHDDSAKSGSCSCLSKDEAYCSICFGVLLPTCYQDDGVEPLRSVSPIDNVTS
IISEAVQREGHQVDEFSLEISLPAVIAANDRAIRLYMKEKYGSANWFDEKIFSQQTMSVK
EALRILLVPSVEKQMNVKHGNNSFRIRLTYTHDEGSQKLLRLLPNDRGRKRKTESRDGSS
KRGSTDDDKQILSESDAFINKNLEGIQDQDFRSLFQLPPEKVLEPCHLVISCQRSPIYIG
GRYLKLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICKGDGYKFHAAGREDIDVRMLG
SGRPFLVEVLNVRSIPSATEVQQIADKINDSEKKHVRVRNLKLVGSEIWTMMREGEAEKQ
KQYAALIWTSRPLTDDDLHNISLIKDMEIVQKTPIRVLHRRSPLERKRIIHWMEIEKISG
GSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSVGVMLSCRAEILQLDVTDVKMDFLQ

Transcript Sequence

Transcript ID

Os04t0561700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:28117990:28122646:-1 gene:Os04g0561700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211B05.2 protein. (Os04t0561700-01)
Sequence

GGAGGTCTCTCTCTCCATAGGACTAGTCTGAACTAGAGGGGATTAACTAGGGTTTAATCA
ACCGCGTCGAGGACCATGGCGGCCGCAGCGGAGGTGGATGCGGAGGCGAGGAGCATCCTC
GAACGCGCAGCGGCGTCCTCCTTCCCACCGCTCCACGCCATCCACCACCTCCTCTCCGTC
GGGGTCTGTGTGCGGTGCATCTTTCGGTTCTTTGGAGCCTTTAGTTATGCAGCACCATGC
CTTTCTCTTACGGCATCAGTTCTGCATTCGTTTCTTGAAGAGCATGACGATTCCGCAAAA
AGTGGGTCTTGTTCATGTTTGTCAAAAGATGAGGCGTACTGCTCTATTTGCTTTGGAGTG
TTACTGCCCACCTGCTATCAAGATGATGGTGTAGAACCACTCCGTAGTGTTTCTCCTATC
GATAATGTTACTTCAATTATATCTGAAGCAGTCCAGAGAGAGGGTCACCAAGTCGATGAG
TTCTCCCTAGAAATTTCACTGCCTGCAGTTATAGCAGCTAATGATCGTGCCATTAGGTTA
TATATGAAAGAGAAATATGGCAGTGCAAATTGGTTCGATGAAAAAATATTTTCTCAACAG
ACAATGTCAGTGAAGGAGGCCTTGAGAATATTGCTAGTACCGTCAGTAGAAAAACAAATG
AATGTGAAACATGGTAATAATTCATTTCGAATTCGCTTAACTTATACTCATGATGAAGGT
TCACAAAAGCTTCTAAGGCTTCTGCCAAATGACCGTGGTCGTAAAAGAAAAACAGAATCA
AGAGATGGAAGCAGTAAAAGGGGCTCAACAGATGATGATAAACAAATATTAAGTGAATCA
GATGCATTCATCAACAAGAACCTTGAAGGCATTCAAGATCAAGACTTCCGTAGTTTATTT
CAATTGCCACCTGAAAAGGTGTTAGAACCCTGCCATCTTGTGATATCTTGCCAACGGTCA
CCCATATATATTGGTGGAAGATACTTGAAGCTTTCAAGGAATGTCAGCCAGTCATGTTGG
ATAATTGATGATGAGAGAATGGGGGAAGCATCAGTTGAGGAGATAATTGGGGAGAATGTC
CGTGCCATCTGCAAAGGTGATGGCTATAAGTTCCATGCTGCTGGAAGAGAAGATATTGAT
GTTCGGATGCTTGGATCTGGTCGTCCATTCTTAGTTGAAGTCTTGAATGTGCGATCTATT
CCATCTGCTACTGAAGTTCAACAAATAGCAGATAAGATTAATGACTCTGAAAAGAAACAT
GTCAGGGTTAGAAATCTCAAGCTGGTAGGCAGTGAAATATGGACAATGATGCGGGAAGGA
GAAGCAGAGAAGCAGAAGCAGTATGCTGCCCTCATATGGACGTCTCGCCCTCTGACGGAT
GATGACCTACATAATATTTCTCTTATCAAAGATATGGAAATTGTACAAAAGACGCCAATA
AGAGTCTTACATCGTAGAAGTCCATTAGAGAGAAAACGGATTATACACTGGATGGAGATT
GAAAAAATTTCTGGCGGGTCAAACTATTACCTGTTGCATCTATGCACTCAAGCTGGGACA
TACATAAAGGAGTTTGTGCACGGAGATCTTGGACGCACACACCCAAGTGTTGGCGTCATG
TTAAGCTGCAGAGCTGAGATACTGCAACTCGATGTCACTGACGTTAAGATGGACTTCCTG
CAGTAATATGCTATTGTCATATTGTATCATGCTCAGTTCGTATCATTGGTTATTGGTGTT
GTACACTATCTGTACTGATGAAATGCGCAGCCTGCAGAAGACCACAAGGCAAGTTCAGAA
AATATGTCATTTTACTATAGTATAACCTTCTGATGAGAGGCTATTTGAGAAATTGAGCTC
AGTCTGCTCCAATGTCAACTTACAGCTATGTATTATGAGCCACAGTTTTGCCAAAAAAAA
CATCATGCTTATACTGGCTTAGGGCCTGTTTAGGAAGCTTATAGCTGCTCCAATGTTAAC
TTACAGCTATATATTATGAGCCACAGTTTTGCC