Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0560600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28079507:28082320:-1 gene:Os04g0560600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 12 description:Calcium-dependent protein kinase, Salt-stress tolerance, Blast disease resistance (Os04t0560600-01)
Sequence	ATGGGCAACTGCTTCACCAAGACGTACGAGATACCCATCACGTCGGGCACGATGCGGCGG CCGGCGTCGACCGCGGAGCGCAGCAAGGCGCGTGGCGGCGATGAGCCGGGGACGTGGCGG CGGCCGAGCTTCCCGAGGCACGGGGCCCCGCCGCACCGGCCGCCGACGGGCTCGTCTTCG GCGGCGGGGGCGCTGTCCCGGAGGGCGTCCGGCGGCGGCGGGGAGATGGGCCCCGTGCTG CAGAGGGCGATGGTGAGCGTGCGGTCGCTGTACCAGCTGGACCGGAAGCTGGGGAGCGGG CAGTTCGGGACGACGTACCTGTGCACGGAGCGCGCGACGGGGAACCGGTACGCGTGCAAG TCGGTGTCGAAGCGGAAGCTGGTGCGGCGCACCGACGTGGACGACGTGCGCCGGGAGATC ACCATCCTGCAGCACCTCAGCGGGCAGCCCAACATCGCGGAGTTCAGGGGCGCGTACGAG GACAACGACCACGTGCACCTCGTCATGGAGTTCTGCTCCGGCGGCGAGCTGTTCGACCGC ATCACGGCCAAGGGGAGCTACTCCGAGCGGCAGGCCGCTGCCGTGTGCCGGGACATCCTC ACCGTCGTTCACGTCTGCCACTTCATGGGGGTCATACACCGCGACCTCAAGCCGGAGAAC TTCCTGCTCGCCAGCGCCGACGACGACGCGCCGCTCAAGGCCATCGACTTCGGACTCTCC GTCTTCATCGAAGAAGGTAAAGTGTACAAGGACATTGTCGGAAGTGCTTATTATGTGGCG CCAGAAGTGTTACAACGAAATTATGGGAAAGAAGCCGACATCTGGAGCGCTGGGGTGATA TTGTATATCCTTCTATGCGGGACGCCCCCATTCTGGGCAGAGACAGAGAAAGGCATATTC GATGCTATACTGGTCAACCAAGTTGATTTCAGTACCAGCCCGTGGCCTTCGATATCTGAA AGTGCAAAGGATCTTATCAGACAAATGTTACATAGAGATCCCCAGAAGAGGATTACTGCA TCGCAGGCCTTAGAACATCGATGGCTCAAAGAAGGCGGTGCATCTGACAGACCTATCGAT AGCGCAGTCCTATCAAGAATGAAGCAATTCAAGGCAATGAACAAGTTAAAGCAATTAGCT CTTAAGGTAATTGCAGAGAACCTATCACCAGAGGAAATCAAGGGCTTGAAACAGATGTTC AATAACATGGATACAGACAGAAGTGGCACAATCACGGTTGAAGAACTGAAGGTTGGTCTG ACAAAGCTAGGATCAAGAATTAGTGAAGCCGAGGTTCAGAAGCTTATGGAAGCAGTTGAC GTAGACAAGAGTGGCAGCATTGATTACTCGGAGTTCCTCACAGCTATGATAAATAAGCAT AAACTGGAAAAGGAGGAGGATTTACTTCGTGCATTTCAACATTTTGACAAAGATAACAGC GGGTACATAACAAGAGATGAACTGGAACAAGCCATGGCAGAGTACGGAATGGGTGATGAA GCAAACATTAAACAAGTACTGGATGAAGTTGACAAAGACAAGGACGGGAGAATTGACTAT GAAGAGTTTGTGGAAATGATGAGGAAAGGAATACAAACCTGA

Peptide Sequence

PEP ID	Os04t0560600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28079507:28082320:-1 gene:Os04g0560600 transcript:Os04t0560600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 12 description:Calcium-dependent protein kinase, Salt-stress tolerance, Blast disease resistance (Os04t0560600-01)
Sequence	MGNCFTKTYEIPITSGTMRRPASTAERSKARGGDEPGTWRRPSFPRHGAPPHRPPTGSSS AAGALSRRASGGGGEMGPVLQRAMVSVRSLYQLDRKLGSGQFGTTYLCTERATGNRYACK SVSKRKLVRRTDVDDVRREITILQHLSGQPNIAEFRGAYEDNDHVHLVMEFCSGGELFDR ITAKGSYSERQAAAVCRDILTVVHVCHFMGVIHRDLKPENFLLASADDDAPLKAIDFGLS VFIEEGKVYKDIVGSAYYVAPEVLQRNYGKEADIWSAGVILYILLCGTPPFWAETEKGIF DAILVNQVDFSTSPWPSISESAKDLIRQMLHRDPQKRITASQALEHRWLKEGGASDRPID SAVLSRMKQFKAMNKLKQLALKVIAENLSPEEIKGLKQMFNNMDTDRSGTITVEELKVGL TKLGSRISEAEVQKLMEAVDVDKSGSIDYSEFLTAMINKHKLEKEEDLLRAFQHFDKDNS GYITRDELEQAMAEYGMGDEANIKQVLDEVDKDKDGRIDYEEFVEMMRKGIQT

Transcript Sequence

Transcript ID	Os04t0560600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28079507:28082320:-1 gene:Os04g0560600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 12 description:Calcium-dependent protein kinase, Salt-stress tolerance, Blast disease resistance (Os04t0560600-01)
Sequence	AACTCACCATTCCACCCTCGCTTCGTCTCGGCGCCACCCCAGGAGAAGGAAAGGAAACGA GGAGGCTTTGCAATGGGCAACTGCTTCACCAAGACGTACGAGATACCCATCACGTCGGGC ACGATGCGGCGGCCGGCGTCGACCGCGGAGCGCAGCAAGGCGCGTGGCGGCGATGAGCCG GGGACGTGGCGGCGGCCGAGCTTCCCGAGGCACGGGGCCCCGCCGCACCGGCCGCCGACG GGCTCGTCTTCGGCGGCGGGGGCGCTGTCCCGGAGGGCGTCCGGCGGCGGCGGGGAGATG GGCCCCGTGCTGCAGAGGGCGATGGTGAGCGTGCGGTCGCTGTACCAGCTGGACCGGAAG CTGGGGAGCGGGCAGTTCGGGACGACGTACCTGTGCACGGAGCGCGCGACGGGGAACCGG TACGCGTGCAAGTCGGTGTCGAAGCGGAAGCTGGTGCGGCGCACCGACGTGGACGACGTG CGCCGGGAGATCACCATCCTGCAGCACCTCAGCGGGCAGCCCAACATCGCGGAGTTCAGG GGCGCGTACGAGGACAACGACCACGTGCACCTCGTCATGGAGTTCTGCTCCGGCGGCGAG CTGTTCGACCGCATCACGGCCAAGGGGAGCTACTCCGAGCGGCAGGCCGCTGCCGTGTGC CGGGACATCCTCACCGTCGTTCACGTCTGCCACTTCATGGGGGTCATACACCGCGACCTC AAGCCGGAGAACTTCCTGCTCGCCAGCGCCGACGACGACGCGCCGCTCAAGGCCATCGAC TTCGGACTCTCCGTCTTCATCGAAGAAGGTAAAGTGTACAAGGACATTGTCGGAAGTGCT TATTATGTGGCGCCAGAAGTGTTACAACGAAATTATGGGAAAGAAGCCGACATCTGGAGC GCTGGGGTGATATTGTATATCCTTCTATGCGGGACGCCCCCATTCTGGGCAGAGACAGAG AAAGGCATATTCGATGCTATACTGGTCAACCAAGTTGATTTCAGTACCAGCCCGTGGCCT TCGATATCTGAAAGTGCAAAGGATCTTATCAGACAAATGTTACATAGAGATCCCCAGAAG AGGATTACTGCATCGCAGGCCTTAGAACATCGATGGCTCAAAGAAGGCGGTGCATCTGAC AGACCTATCGATAGCGCAGTCCTATCAAGAATGAAGCAATTCAAGGCAATGAACAAGTTA AAGCAATTAGCTCTTAAGGTAATTGCAGAGAACCTATCACCAGAGGAAATCAAGGGCTTG AAACAGATGTTCAATAACATGGATACAGACAGAAGTGGCACAATCACGGTTGAAGAACTG AAGGTTGGTCTGACAAAGCTAGGATCAAGAATTAGTGAAGCCGAGGTTCAGAAGCTTATG GAAGCAGTTGACGTAGACAAGAGTGGCAGCATTGATTACTCGGAGTTCCTCACAGCTATG ATAAATAAGCATAAACTGGAAAAGGAGGAGGATTTACTTCGTGCATTTCAACATTTTGAC AAAGATAACAGCGGGTACATAACAAGAGATGAACTGGAACAAGCCATGGCAGAGTACGGA ATGGGTGATGAAGCAAACATTAAACAAGTACTGGATGAAGTTGACAAAGACAAGGACGGG AGAATTGACTATGAAGAGTTTGTGGAAATGATGAGGAAAGGAATACAAACCTGAGGAAAC TCTCTGGTCTCTTTGTGAATAAATTTGTATAGACATGTTCGAGTATATGCTGCAAGCAGA TGAAACGCAAAAAAGTTAACCCCAAAAGCAGTTGCTTTGGCTGTTGTGGTTTGATCTAGT ATGTGTATTTGTTGATAACCAGTATGCAAATAAAAACATATATAGAATCAAGAAATTTAC CTACCGC