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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0560200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:28065102:28066907:1 gene:Os04g0560200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os04t0560200-01)
Sequence

ATGGAAGAGGGGGAGGCCAAGAAGACAGGCCTGGAGGGCACTGGGCTGTCGCTCCCGGGC
AGCTCACACGGCAATCTACGGAGCGCCGGCAGCGACCAGCAGCTGAAGCAGATGCTGGAC
TCCCTCAAATCGTCCAAATCACCCGCTGTTATCAACTATGGTGCCTCATGGTGCCGTGTT
TGCAGTCAGATTCTTCCACCCTTCTGCAGGTTCAGCAATGAATTCAAGAATCTTACCTTC
ATTTATGCTGATATTGACGAATGCCCAGAAACAACACAAAACATCCGATACACCCCAACC
TTCCATTTCTACCGGGATGGAGAGAAGGTCGATGAGATGCTTGGTACAGGAGAAGAGAGG
CTGCATGACCGGTTATGGTTGCATTCTTGA

Peptide Sequence

PEP ID

Os04t0560200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:28065102:28066907:1 gene:Os04g0560200 transcript:Os04t0560200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os04t0560200-01)
Sequence

MEEGEAKKTGLEGTGLSLPGSSHGNLRSAGSDQQLKQMLDSLKSSKSPAVINYGASWCRV
CSQILPPFCRFSNEFKNLTFIYADIDECPETTQNIRYTPTFHFYRDGEKVDEMLGTGEER
LHDRLWLHS

Transcript Sequence

Transcript ID

Os04t0560200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:28065102:28066907:1 gene:Os04g0560200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os04t0560200-01)
Sequence

ATCCCCTCGTGGCCTCGTTGCCGTCGTGCGCGGTGCGCCACCTCCACGGCGCCGCTCGCC
GTCGTCCCCTCCCTTCTTCCCGTCCTACTCTCTCGGTGTGCGCGCTCTCCGCCTCCGCCT
TCCAAGCGGGAGCAAAGCTGGAAGGATGGAAGAGGGGGAGGCCAAGAAGACAGGCCTGGA
GGGCACTGGGCTGTCGCTCCCGGGCAGCTCACACGGCAATCTACGGAGCGCCGGCAGCGA
CCAGCAGCTGAAGCAGATGCTGGACTCCCTCAAATCGTCCAAATCACCCGCTGTTATCAA
CTATGGTGCCTCATGGTGCCGTGTTTGCAGTCAGATTCTTCCACCCTTCTGCAGGTTCAG
CAATGAATTCAAGAATCTTACCTTCATTTATGCTGATATTGACGAATGCCCAGAAACAAC
ACAAAACATCCGATACACCCCAACCTTCCATTTCTACCGGGATGGAGAGAAGGTCGATGA
GATGCTTGGTACAGGAGAAGAGAGGCTGCATGACCGGTTATGGTTGCATTCTTGATAGGG
ATTTGCCGGGCTGTTGGTCTCATGCACAATATTTTCTCTCTCTCTTTTATCCTACTTTCG
TGCTTTGTTGTCAACCTCTGAGCCAATTCAAGGTTTATGTTGGTGTTTGTAATGTTGATC
ATGGTCATCTTTAGTGACATACACCATTATATATCAGAATTGGTGTACCGGTTTTTCTCT
CATGCTTATGTCAAAACTGAGAAAGAATACCGT