Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0560100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:28061538:28063632:-1 gene:Os04g0560100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 86A7-1 description:Cytochrome P450 family protein. (Os04t0560100-01);Conserved hypothetical protein. (Os04t0560100-02)
Sequence	ATGGAGGCGGGGACGTGGGCGGTGGTCGTGGCGGCCGTGGCCGCGTACATGGCGTGGTTC TGGAGGATGTCGCGCGGGCTGAGCGGGCCGAGGGTGTGGCCGGTGGTGGGGAGCCTGCCG GGGCTGGTGCGGCACGCGGAGGACATGCACGAGTGGATCGCCGCCAACCTCCGCCGCACG CGGGGCACCTACCAGACGTGCATCTTCGCCGTGCCCGGGCTGGCGCGCCGCGGCGGGCTG GTCACGGTGACGTGCGACCCGAGGAACCTGGAGCACGTCCTCAAGTCCCGGTTCGACAAC TACCCCAAGGGCCCCTTCTGGCACGGCGTGTTCGGGGACCTCCTCGGCGACGGCATCTTC AACTCCGACGGGGAGACGTGGGTGGCGCAGCGGAAGACGGCGGCGCTGGAGTTCACCACG CGCACGCTGCGCACCGCCATGTCGCGGTGGGTGTCGCGGTCCATCCACAGCCGCCTGCTG CCCATCCTGTCCGACGCCGCCGCGGCCGGTGGCGGTGGCGGCGGCGCCACCGTCGACCTC CAGGACCTCCTCCTCCGCCTCACCTTCGACAACATCTGCGGCCTCGCGTTCGGCAAGGAC CCCGAGACGCTCGCCCGCGGCCTGCCGGAGAACGACTTCGCCTCGGCGTTCGACCGCGCC ACCGAGGCCACTCTCAACCGCTTCATCTTCCCGGAGTGCGTGTGGCGGTTCAAGAAGTGG ATGGGGCTCGGCATGGAGACCACGCTTGCGCGCAGCGTCCAGCACGTCGACCGCTACCTC TCGGCGGTCATCAAGGCGCGCAAGCTCGAGCTCGCCGCCGGCAACGGCAAGGGCGACGCG TCGTCGGCCACGCCGCACGACGACCTCCTGTCGCGCTTCATGCGGAAGGGGACCTACTCC GACGAGTCGCTGCAGCACGTGGCGCTCAACTTCATCCTCGCCGGCCGCGACACCTCCTCG GTGGCGCTCTCCTGGTTCTTCTGGCTGGTCTCCACCCACCCCGCCGTCGAGCGCAAGATC GTCCGCGAGCTCTGCACCGTCCTGGCCGCGTCGCGCGGCGCCGACGACCCGGCATTGTGG CTCGCCGCGCCGCTCAACTTCGAGGAGCTCGACCAGCTCGTCTACCTCAAAGCGGCGCTC TCGGAGACCCTCCGCCTGTACCCCTCCGTGCCGGAGGACTCCAAGCACGTCGTCGCCGAC GACGTCCTCCCCGACGGCACGTTCGTGCCGGCGGGGTCGTCGGTCACGTACTCCATCTAC TCCGCGGGGCGCATGAAGACGGTGTGGGGCGACGACTGCCTGGAGTTCCGGCCGGAGCGG TGGCTGTCGGCCGACGGCACGAAGTTCGAGCCGCACGACTCGTTCAGGTTCGTGGCGTTC AACGCCGGGCCACGCATTTGCCTCGGGAAGGACCTCGCGTACCTGCAGATGAGGAACATC GCCGGCAGCGTGCTCCTCCGCCACCGCCTGGCCGTGGCGCCGGGCCACCGCGTCGAGCAG AAGATGTCGCTCACGCTGTTCATGAAGCACGGGCTCCGGATGGAGGTGCGCCCGCGCGAC CTCGCCCCGATCGTCGACGAGCTCCGCGGCGCCGGGGAGTACGCCGCCGCGGCGCGCGCC ACCGCGGCCTGCGCTTAG

Peptide Sequence

PEP ID	Os04t0560100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:28061538:28063632:-1 gene:Os04g0560100 transcript:Os04t0560100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 86A7-1 description:Cytochrome P450 family protein. (Os04t0560100-01);Conserved hypothetical protein. (Os04t0560100-02)
Sequence	MEAGTWAVVVAAVAAYMAWFWRMSRGLSGPRVWPVVGSLPGLVRHAEDMHEWIAANLRRT RGTYQTCIFAVPGLARRGGLVTVTCDPRNLEHVLKSRFDNYPKGPFWHGVFGDLLGDGIF NSDGETWVAQRKTAALEFTTRTLRTAMSRWVSRSIHSRLLPILSDAAAAGGGGGGATVDL QDLLLRLTFDNICGLAFGKDPETLARGLPENDFASAFDRATEATLNRFIFPECVWRFKKW MGLGMETTLARSVQHVDRYLSAVIKARKLELAAGNGKGDASSATPHDDLLSRFMRKGTYS DESLQHVALNFILAGRDTSSVALSWFFWLVSTHPAVERKIVRELCTVLAASRGADDPALW LAAPLNFEELDQLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIY SAGRMKTVWGDDCLEFRPERWLSADGTKFEPHDSFRFVAFNAGPRICLGKDLAYLQMRNI AGSVLLRHRLAVAPGHRVEQKMSLTLFMKHGLRMEVRPRDLAPIVDELRGAGEYAAAARA TAACA

Transcript Sequence

Transcript ID	Os04t0560100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:28061538:28063632:-1 gene:Os04g0560100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 86A7-1 description:Cytochrome P450 family protein. (Os04t0560100-01);Conserved hypothetical protein. (Os04t0560100-02)
Sequence	GCTGGAGTAGAGTGGCATCCTGGCAACTCTGTATATATATATTTTTCCCTTCTGTATATT AATTGCCATCCATCGCATTGCTTCTCGGGCAGGTTCTACTCCTATATATCGTCTCGCTTC TCTCTCTCGATCTCAGGTCAGGGGCGCTAGCTGGCCACTGGCGACTCACACAGTCACACA CACACACACTCTCTCGTCCTTGCTGCTAGCTATCTATCGCTGCTTGCCCCGGCCCATGCA TGTGAGCTCACTTATTATAGATCGATCGCCATAGCCTAGCTTGGTGGTGGTGGTGGTGAT GGAGGCGGGGACGTGGGCGGTGGTCGTGGCGGCCGTGGCCGCGTACATGGCGTGGTTCTG GAGGATGTCGCGCGGGCTGAGCGGGCCGAGGGTGTGGCCGGTGGTGGGGAGCCTGCCGGG GCTGGTGCGGCACGCGGAGGACATGCACGAGTGGATCGCCGCCAACCTCCGCCGCACGCG GGGCACCTACCAGACGTGCATCTTCGCCGTGCCCGGGCTGGCGCGCCGCGGCGGGCTGGT CACGGTGACGTGCGACCCGAGGAACCTGGAGCACGTCCTCAAGTCCCGGTTCGACAACTA CCCCAAGGGCCCCTTCTGGCACGGCGTGTTCGGGGACCTCCTCGGCGACGGCATCTTCAA CTCCGACGGGGAGACGTGGGTGGCGCAGCGGAAGACGGCGGCGCTGGAGTTCACCACGCG CACGCTGCGCACCGCCATGTCGCGGTGGGTGTCGCGGTCCATCCACAGCCGCCTGCTGCC CATCCTGTCCGACGCCGCCGCGGCCGGTGGCGGTGGCGGCGGCGCCACCGTCGACCTCCA GGACCTCCTCCTCCGCCTCACCTTCGACAACATCTGCGGCCTCGCGTTCGGCAAGGACCC CGAGACGCTCGCCCGCGGCCTGCCGGAGAACGACTTCGCCTCGGCGTTCGACCGCGCCAC CGAGGCCACTCTCAACCGCTTCATCTTCCCGGAGTGCGTGTGGCGGTTCAAGAAGTGGAT GGGGCTCGGCATGGAGACCACGCTTGCGCGCAGCGTCCAGCACGTCGACCGCTACCTCTC GGCGGTCATCAAGGCGCGCAAGCTCGAGCTCGCCGCCGGCAACGGCAAGGGCGACGCGTC GTCGGCCACGCCGCACGACGACCTCCTGTCGCGCTTCATGCGGAAGGGGACCTACTCCGA CGAGTCGCTGCAGCACGTGGCGCTCAACTTCATCCTCGCCGGCCGCGACACCTCCTCGGT GGCGCTCTCCTGGTTCTTCTGGCTGGTCTCCACCCACCCCGCCGTCGAGCGCAAGATCGT CCGCGAGCTCTGCACCGTCCTGGCCGCGTCGCGCGGCGCCGACGACCCGGCATTGTGGCT CGCCGCGCCGCTCAACTTCGAGGAGCTCGACCAGCTCGTCTACCTCAAAGCGGCGCTCTC GGAGACCCTCCGCCTGTACCCCTCCGTGCCGGAGGACTCCAAGCACGTCGTCGCCGACGA CGTCCTCCCCGACGGCACGTTCGTGCCGGCGGGGTCGTCGGTCACGTACTCCATCTACTC CGCGGGGCGCATGAAGACGGTGTGGGGCGACGACTGCCTGGAGTTCCGGCCGGAGCGGTG GCTGTCGGCCGACGGCACGAAGTTCGAGCCGCACGACTCGTTCAGGTTCGTGGCGTTCAA CGCCGGGCCACGCATTTGCCTCGGGAAGGACCTCGCGTACCTGCAGATGAGGAACATCGC CGGCAGCGTGCTCCTCCGCCACCGCCTGGCCGTGGCGCCGGGCCACCGCGTCGAGCAGAA GATGTCGCTCACGCTGTTCATGAAGCACGGGCTCCGGATGGAGGTGCGCCCGCGCGACCT CGCCCCGATCGTCGACGAGCTCCGCGGCGCCGGGGAGTACGCCGCCGCGGCGCGCGCCAC CGCGGCCTGCGCTTAGAAGATCCCGGGCGTTGGACGAAGTCAATTGGAAATGGCAAAAAA ATATGTAGATAGATGAGAGTCCAAGATAGTAATTACTAAAGGGTTTGTATGGTTGGTGAG GTCATTTAAATCACTTGCTTTTACAGTTCATTACCAGTCGATAGAGGAAATGTCT