Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0558500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:27990856:27992378:-1 gene:Os04g0558500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0558500-01)
Sequence

ATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCACCGGAAGCGC
AAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGCTGAGGAGGAG
GACATGGAGGAGCTGGAGCGGGAGGTGGACCGTCTGGGCCGCCGCCTCCTCCAGCACCGC
CGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGCCCTCCGCCCC
CGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGTTGCGAAAGTT
GACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGCGAATATTGGG
GCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGAGAAGCTTGAG
CATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAG

Peptide Sequence

PEP ID

Os04t0558500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:27990856:27992378:-1 gene:Os04g0558500 transcript:Os04t0558500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0558500-01)
Sequence

MAGASLTPSRTGAQSSHRKRKVPAAAAAAPAREDEAAEEEDMEELEREVDRLGRRLLQHR
REDAARLLNAAASRLTALRPRLLEVTTASQHIAGTPVAKVDQEKKEKLRIVKAKSEANIG
AMPMVLKRIGESIAKIEKLEHLNVNIHPVFKTKR

Transcript Sequence

Transcript ID

Os04t0558500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27990856:27992378:-1 gene:Os04g0558500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0558500-01)
Sequence

GCTCCTTCCGCTCGAGCATCTCTCTCTGGTCTCCGCTCGCCGCGGCTTCACGTGCTCCAA
GCTCCCCCCCATGGCGGGCGCCTCGCTCACCCCAAGCCGAACTGGAGCCCAGAGCAGCCA
CCGGAAGCGCAAGGTCCCCGCGGCCGCTGCCGCCGCCCCGGCCCGGGAGGACGAGGCGGC
TGAGGAGGAGGACATGGAGGAGCTGGAGCGGGAGGTGGACCGTCTGGGCCGCCGCCTCCT
CCAGCACCGCCGCGAAGACGCCGCCCGCCTCCTCAACGCCGCCGCCTCCCGCCTCACCGC
CCTCCGCCCCCGCCTCCTCGAAGTTACAACTGCATCGCAGCATATTGCTGGAACACCAGT
TGCGAAAGTTGACCAAGAGAAGAAGGAAAAACTAAGGATCGTCAAGGCCAAAAGTGAGGC
GAATATTGGGGCTATGCCCATGGTGTTGAAGAGAATCGGTGAATCTATCGCAAAGATCGA
GAAGCTTGAGCATTTGAATGTGAATATCCATCCCGTTTTCAAAACTAAACGGTAGTGATG
GACTGATGGTAACATGTTCTTGTATGATTCATTATGCATACCATCTGTAGCATTTTGATG
GTAAGTCTTTGTGTTGATTCAGCAGTATACCATTTGTAGCATTTTGATGTTGGAATAGGC
TGATTCAGCAGCATGTAGTTTGAAAAGGGATTCAACAGAAGTTTGTAGTGGGAGTTTCTA
CTAACAAGACAGCTTTAGTTAGGCGTGGCTTGTAATATGTTTTCTACTTGTATTTAATCA
GAAAGCAACATGTAGCTGTTTGTCACCACTCTTGCTTGTAAGGCTGTTGACAAAATCCCA
ACCGACCATTGTGATTGTGTGGAATACTACAACGTTGAATTTGTAG