Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0558400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27984142:27990550:1 gene:Os04g0558400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0558400-01);Similar to acyl-CoA thioesterase family protein. (Os04t0558400-02)
Sequence	ATGGATCGGGAAGAAGTGACGGAGTTCCTCGGCCAGGTGCCCCTCCTGCAGTGCCTCCCC AGCTCCTCCATCCGCAGGATCGCCGACGCCGTCCTGGTGAAGCGCTACGAACCTGGTGGT TACGTTGCTCGTGAAGGTGACCCTGTAGATGGCCTTTACATCATATTGGATGGGCAGGCT GAGGTTTCAGCTCCTGCAAACACAGAAGAAGAAAACCGCCCTGACTATGTGTTAAATAAG TATGACTACTTTGGTTATGGAACCAATAGTTCTGTGCATCAAGTAAATGTTATTGCAGTA TCAAAGCTGACCTGCTTCGTATTGCCAAATCAATATGGACACTTGTTGCAACCAAAGACC ATTTGGAGTGCAGAAGAGACACCTGAGAACCATTCTTTGCTAGAACAAATTTTGCACTTA GAGCCATTGGAGGTCGATATCTTCCGTGGGTTTACTTTGCCAGGAGCTCCGACTTTTAGG CAAGTTTTTGGAGGACAGTTGATAGGACAGGCACTAGCAGCAGCATCCAAGACCGTTGAC TGCCTAAAAGCGGTGCACAGTTTGCACGCAATTTTCCTTATCGCAGGAGACAAGAATTTG CCAATAATATATCAGGTTCATCGGGCGCGCGATGGAACAAGCTTTGCCACCAGAAAAGTG GAGGCAAAGCAAAAGGGCCTTGTCATTTTCACCTTGATTGCTTCATTCCAGAAAGACGAA TTAGGGTTTGAGCATCAAGCTGCAATCATGCCTGATGTTCCTCCTCCAGAAGAGCTCCTG AATCTGGAAGAGATACGGGAAAGAAGACTTACTGATCCTCGCTTCCCAATGCAATATAGG AACTCAGCTGCCAAGAAAAAGTTCGTACCTTGGCCCATAGAAATGAGGTTTTGTGAAGAT TCAGCATCTCAACATAAACCAAGCTTAAATTATTGGTTTAGAGCCAGAGGAAAACTTTCT GATGATCCAGCACTGCATAGGTGTGTTGTAGCATATGCTTCGGATCTACTATATTCTGGT GTCAGCCTAAATCCTCATAGGGAGAAGGGTCTGAAGACATACTCACTCAGTCTTGATCAC TCGATTTGGTTCCACAAGCCTGTGAAAGCTGATGATTGGCTTTTATATGTGATCGACAGC CCATCTGCACACGGTGGGCGGGGTTTTGTTACAGGGCGAATGTTCAACCGACAAGGAGAG CTCGTCATGTCGTTGACCCAAGAGGCGCTGATTAGGAGGGCGAAGACGCCAGGACAACCG TCACAAACCCCAAGGCCAAAGCTTTGA

Peptide Sequence

PEP ID	Os04t0558400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27984142:27990550:1 gene:Os04g0558400 transcript:Os04t0558400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0558400-01);Similar to acyl-CoA thioesterase family protein. (Os04t0558400-02)
Sequence	MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAREGDPVDGLYIILDGQA EVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSKLTCFVLPNQYGHLLQPKT IWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFRQVFGGQLIGQALAAASKTVD CLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATRKVEAKQKGLVIFTLIASFQKDE LGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCED SASQHKPSLNYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHREKGLKTYSLSLDH SIWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELVMSLTQEALIRRAKTPGQP SQTPRPKL

Transcript Sequence

Transcript ID	Os04t0558400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27984142:27990550:1 gene:Os04g0558400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0558400-01);Similar to acyl-CoA thioesterase family protein. (Os04t0558400-02)
Sequence	GATCTCCTTCGCTTTAAATTTTGTGGTAGATTTTTGTCTCCTTCGCTCTCCACGCTACCG CCTCGCCGTGCCGGAGCCCGGGCGTTCCCCGCCGCCGAGAACCTCCGCCTCCGCCTCCAT CTCCTCCGCCGCCGCCGCAGATGGATCGGGAAGAAGTGACGGAGTTCCTCGGCCAGGTGC CCCTCCTGCAGTGCCTCCCCAGCTCCTCCATCCGCAGGATCGCCGACGCCGTCCTGGTGA AGCGCTACGAACCTGGTGGTTACGTTGCTCGTGAAGGTGACCCTGTAGATGGCCTTTACA TCATATTGGATGGGCAGGCTGAGGTTTCAGCTCCTGCAAACACAGAAGAAGAAAACCGCC CTGACTATGTGTTAAATAAGTATGACTACTTTGGTTATGGAACCAATAGTTCTGTGCATC AAGTAAATGTTATTGCAGTATCAAAGCTGACCTGCTTCGTATTGCCAAATCAATATGGAC ACTTGTTGCAACCAAAGACCATTTGGAGTGCAGAAGAGACACCTGAGAACCATTCTTTGC TAGAACAAATTTTGCACTTAGAGCCATTGGAGGTCGATATCTTCCGTGGGTTTACTTTGC CAGGAGCTCCGACTTTTAGGCAAGTTTTTGGAGGACAGTTGATAGGACAGGCACTAGCAG CAGCATCCAAGACCGTTGACTGCCTAAAAGCGGTGCACAGTTTGCACGCAATTTTCCTTA TCGCAGGAGACAAGAATTTGCCAATAATATATCAGGTTCATCGGGCGCGCGATGGAACAA GCTTTGCCACCAGAAAAGTGGAGGCAAAGCAAAAGGGCCTTGTCATTTTCACCTTGATTG CTTCATTCCAGAAAGACGAATTAGGGTTTGAGCATCAAGCTGCAATCATGCCTGATGTTC CTCCTCCAGAAGAGCTCCTGAATCTGGAAGAGATACGGGAAAGAAGACTTACTGATCCTC GCTTCCCAATGCAATATAGGAACTCAGCTGCCAAGAAAAAGTTCGTACCTTGGCCCATAG AAATGAGGTTTTGTGAAGATTCAGCATCTCAACATAAACCAAGCTTAAATTATTGGTTTA GAGCCAGAGGAAAACTTTCTGATGATCCAGCACTGCATAGGTGTGTTGTAGCATATGCTT CGGATCTACTATATTCTGGTGTCAGCCTAAATCCTCATAGGGAGAAGGGTCTGAAGACAT ACTCACTCAGTCTTGATCACTCGATTTGGTTCCACAAGCCTGTGAAAGCTGATGATTGGC TTTTATATGTGATCGACAGCCCATCTGCACACGGTGGGCGGGGTTTTGTTACAGGGCGAA TGTTCAACCGACAAGGAGAGCTCGTCATGTCGTTGACCCAAGAGGCGCTGATTAGGAGGG CGAAGACGCCAGGACAACCGTCACAAACCCCAAGGCCAAAGCTTTGAGAGGTGCAGAAGA GCAGTATTATCGTTTCATTTTTGGCACTTTCACAGTTATTTTCCTTTTCAATGGAAGTCT ATAACACGTAGACGTGAAGCCGAAGTATAGCATACTGCATATATGTAGCAAGAAAAAACG ATGGTAAAACTGGTTCTGTAATTCACGAACAGCTTACTGACATACCACGTATGTATTGGA TCGGGAAAAATAAGCGAAGAACTTGGTATCGCTTTTTTTTTATCTCAATAAAGCCTTCAA TTATT