Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0557800-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:27949384:27955640:-1 gene:Os04g0557800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE LEAF, TRANSCRIPTIONAL ACTIVATOR A description:Similar to R-type basic helix-loop-helix protein. (Os04t0557800-00)
Sequence	ATGGAAGAGACCCCTCTGCCATCCGGGAAGAACTTCAGGAGCCAGCTTGCTGCTGCAGCG AGGAGCATCAATTGGACGTATGCCATATTTTGGTCCATTTCAACCAGCCGCCCAGGAGTT CTGACTTGGAAGGACGGCTTCTACAACGGCGAGATAAAGACGAGGAAGATCACGAACTCC ATGAACCTCATGGCCGACGAGCTGGTCCTGCAGAGAAGCGAGCAGCTGAGGGAGCTCTAC GACTCTCTCCTCTCCGGCGAGTGCGGCCACCGAGCGAGGAGGCCCGTCGCTGCACTGTTG CCGGAAGATCTCGGGGACACGGAATGGTACTACGTCGTCTGCATGACCTACGCCTTCGGC CCCCGCCAAGGGTTGCCAGGCAAAAGCTTCGCAAGCAATGAATTTGTTTGGCTGACAAAC GCTCAGTCTGCAGATAGAAAACTATTCCATCGCGCGCTTATAGCAAAGAGTGCATCTATT AAGACAATCGTCTGCGTGCCATTTATCATGCATGGTGTCCTTGAGCTCGGGACCACTGAT CCGATTTCGGAGGACCCGGCTCTCGTCGACCGTATCGCGGCGTCGTTCTGGGATACGCCG CCCCGCGCGGCGTTCTCGTCGGAGGCGGGAGACGCCGACATCGTCGTCTTCGAAGACCTC GACCATGGCAACGCCGCCGTCGAAGCGACGACGACGACGGTCCCGGGGGAGCCACACGCG GTAGCCGGCGGCGAGGTCGCCGAGTGCGAGCCCAACTCCGACAACGACCTCGAGCAGATC ACCATGGACGACATCGGCGAGCTCTACAGCCTCTGCGAGGAGCTGGACGTCGTGCGCCCT CTCGACGACGACAGTAGCAGCTGGGCGGTCGCGGATCCCTGGTCGTCCTTTCAGCTAGTT CCGACGTCTTCTCCGGCGCCGGATCAGGCGCCGGCGGCGGAAGCTACTGACGTCGACGAC GTCGTCGTCGCCGCTTTAGACAGTAGCTCCATTGATGGATCTTGCAGGCCGTCGCCGTCG AGTTTTGTGGCGTGGAAGAGGACGGCGGACTCGGACGAGGTGCAGGCCGTGCCGCTCATC AGCGGAGAGCCGCCACAGAAGTTGCTGAAGAAAGCTGTCGCCGGAGCCGGTGCCTGGATG AACAATGGTGACAGCAGCGCGGCGGCGATGACGACTCAAGGAAGCAGCATCAAGAACCAT GTCATGTCAGAGAGAAGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAATCA GTTGTCCCGTCCATTCACAGGGTGGACAAAGCATCCATTCTCGCAGAAACGATAGCCTAC CTCAAAGAGCTGGAGAAAAGAGTGGAAGAGCTGGAATCCAGCAGCCAACCATCGCCATGT CCATTGGAAACAAGAAGCAGGCGAAAGTGCCGTGAGATCACTGGGAAGAAGGTTTCTGCA GGAGCGAAGAGAAAGGCGCCGGCGCCGGAGGTGGCCAGCGACGACGACACCGACGGGGAG CGGCGCCATTGTGTGAGCAACGTGAACGTCACCATCATGGACAACAAGGAGGTTCTCCTC GAGCTGCAATGCCAGTGGAAGGAATTGCTGATGACGAGAGTGTTCGACGCGATCAAGGGA GTCTCCCTGGATGTCCTCTCGGTGCAGGCATCAACATCGGATGGTCTCCTTGGACTGAAG ATACAAGCCAAGTTTGCCTCATCTGCTGCCGTCGAACCTGGATGA

Peptide Sequence

PEP ID	Os04t0557800-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:27949384:27955640:-1 gene:Os04g0557800 transcript:Os04t0557800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE LEAF, TRANSCRIPTIONAL ACTIVATOR A description:Similar to R-type basic helix-loop-helix protein. (Os04t0557800-00)
Sequence	MEETPLPSGKNFRSQLAAAARSINWTYAIFWSISTSRPGVLTWKDGFYNGEIKTRKITNS MNLMADELVLQRSEQLRELYDSLLSGECGHRARRPVAALLPEDLGDTEWYYVVCMTYAFG PRQGLPGKSFASNEFVWLTNAQSADRKLFHRALIAKSASIKTIVCVPFIMHGVLELGTTD PISEDPALVDRIAASFWDTPPRAAFSSEAGDADIVVFEDLDHGNAAVEATTTTVPGEPHA VAGGEVAECEPNSDNDLEQITMDDIGELYSLCEELDVVRPLDDDSSSWAVADPWSSFQLV PTSSPAPDQAPAAEATDVDDVVVAALDSSSIDGSCRPSPSSFVAWKRTADSDEVQAVPLI SGEPPQKLLKKAVAGAGAWMNNGDSSAAAMTTQGSSIKNHVMSERRRREKLNEMFLILKS VVPSIHRVDKASILAETIAYLKELEKRVEELESSSQPSPCPLETRSRRKCREITGKKVSA GAKRKAPAPEVASDDDTDGERRHCVSNVNVTIMDNKEVLLELQCQWKELLMTRVFDAIKG VSLDVLSVQASTSDGLLGLKIQAKFASSAAVEPG

Transcript Sequence

Transcript ID	Os04t0557800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27949384:27955640:-1 gene:Os04g0557800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE LEAF, TRANSCRIPTIONAL ACTIVATOR A description:Similar to R-type basic helix-loop-helix protein. (Os04t0557800-00)
Sequence	TGCTAGATCTCTCCTCCACATCCGGACTCTCTCTATCAAATTTACGTAAGCGCAGTGAGA AAAATAATTAGCTGGGCCACCAGCATACTGTTGGCGTACAGCTGCAAATACCTGTCGAGC TAATCTTGGTTAAAATGTTGGTTTAATTCTGTTGCTTAATTGCTGGTGAGGAGGAGCACT CACTATATAGCTCAATCCATCTTCCTCTGCAAAACGTACGCACGACACTCTGGTTGCGAT CGATTATCACTCCCTGATCGCGAGTTCTTGGTCTGCGAGCGTCTGCAATTAAGGGAAGAG TTCCTCTTTGTTTTGACGAGGATCGAGGATTGTTTGGACGAACCAGCAGCAGCGTACGTG CCAATTTCATTGATAGTCGCTGTATCTGATTTACAGGAAAAATACATACAACAGTGTGTG GTAAAGTATACTACTATTACTGGAGTACTAATTAATGGAAGAGACCCCTCTGCCATCCGG GAAGAACTTCAGGAGCCAGCTTGCTGCTGCAGCGAGGAGCATCAATTGGACGTATGCCAT ATTTTGGTCCATTTCAACCAGCCGCCCAGGAGTTCTGACTTGGAAGGACGGCTTCTACAA CGGCGAGATAAAGACGAGGAAGATCACGAACTCCATGAACCTCATGGCCGACGAGCTGGT CCTGCAGAGAAGCGAGCAGCTGAGGGAGCTCTACGACTCTCTCCTCTCCGGCGAGTGCGG CCACCGAGCGAGGAGGCCCGTCGCTGCACTGTTGCCGGAAGATCTCGGGGACACGGAATG GTACTACGTCGTCTGCATGACCTACGCCTTCGGCCCCCGCCAAGGGTTGCCAGGCAAAAG CTTCGCAAGCAATGAATTTGTTTGGCTGACAAACGCTCAGTCTGCAGATAGAAAACTATT CCATCGCGCGCTTATAGCAAAGAGTGCATCTATTAAGACAATCGTCTGCGTGCCATTTAT CATGCATGGTGTCCTTGAGCTCGGGACCACTGATCCGATTTCGGAGGACCCGGCTCTCGT CGACCGTATCGCGGCGTCGTTCTGGGATACGCCGCCCCGCGCGGCGTTCTCGTCGGAGGC GGGAGACGCCGACATCGTCGTCTTCGAAGACCTCGACCATGGCAACGCCGCCGTCGAAGC GACGACGACGACGGTCCCGGGGGAGCCACACGCGGTAGCCGGCGGCGAGGTCGCCGAGTG CGAGCCCAACTCCGACAACGACCTCGAGCAGATCACCATGGACGACATCGGCGAGCTCTA CAGCCTCTGCGAGGAGCTGGACGTCGTGCGCCCTCTCGACGACGACAGTAGCAGCTGGGC GGTCGCGGATCCCTGGTCGTCCTTTCAGCTAGTTCCGACGTCTTCTCCGGCGCCGGATCA GGCGCCGGCGGCGGAAGCTACTGACGTCGACGACGTCGTCGTCGCCGCTTTAGACAGTAG CTCCATTGATGGATCTTGCAGGCCGTCGCCGTCGAGTTTTGTGGCGTGGAAGAGGACGGC GGACTCGGACGAGGTGCAGGCCGTGCCGCTCATCAGCGGAGAGCCGCCACAGAAGTTGCT GAAGAAAGCTGTCGCCGGAGCCGGTGCCTGGATGAACAATGGTGACAGCAGCGCGGCGGC GATGACGACTCAAGGAAGCAGCATCAAGAACCATGTCATGTCAGAGAGAAGGCGCCGGGA GAAGCTCAACGAGATGTTCCTGATTCTCAAATCAGTTGTCCCGTCCATTCACAGGGTGGA CAAAGCATCCATTCTCGCAGAAACGATAGCCTACCTCAAAGAGCTGGAGAAAAGAGTGGA AGAGCTGGAATCCAGCAGCCAACCATCGCCATGTCCATTGGAAACAAGAAGCAGGCGAAA GTGCCGTGAGATCACTGGGAAGAAGGTTTCTGCAGGAGCGAAGAGAAAGGCGCCGGCGCC GGAGGTGGCCAGCGACGACGACACCGACGGGGAGCGGCGCCATTGTGTGAGCAACGTGAA CGTCACCATCATGGACAACAAGGAGGTTCTCCTCGAGCTGCAATGCCAGTGGAAGGAATT GCTGATGACGAGAGTGTTCGACGCGATCAAGGGAGTCTCCCTGGATGTCCTCTCGGTGCA GGCATCAACATCGGATGGTCTCCTTGGACTGAAGATACAAGCCAAGTTTGCCTCATCTGC TGCCGTCGAACCTGGATGATTACAGAAGCTCTCCGGAAAGCTATAGCAAGCTAGCTAGCT AGAAGGTTGAGATCAGTATCGTCTTGGTCATTTGCTCTCATCTTGTTTAGGAGGTACCGG GAAATAAATCTTGTCGCTCTGATCAGTGCCTCCTTACTAGTCTCGTGATCTGTTGTAAGT AATAGTTAGACATGCATATATATCATACAACAACGTTTGATCTTGCATGGTAGCATATAT ATGTACACCACATTTCTTATATCTTTACTCCTTTAAAATTCAGTGAGGATGGTAAGTGAT GAATCTGCCACCCCATCACCAACTCCCTAAAATTCTG