Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0557200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27881155:27890773:-1 gene:Os04g0557200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 015, GLABRA3B, GLABRA 3B description:Similar to Anthocyanin regulatory B protein (Fragment). (Os04t0557200-01)
Sequence	ATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCACTTCAGG AGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGATCTTTTGGTCCATT TCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAACGGCGTGGTAAAG ACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCAGAGAAGC GAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCGAGG AGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATGGTACTACGTCGTC TGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAGCTATGCAAGCAAT GCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTA TTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTT GAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAACCGAATCGTTGCA TATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAGCACTAGCCCTTCT CCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAACGCCATC GAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGATCCAATC ACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCTGGACATGGACCTG GACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAACCCCAGCTCTTTT CAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAATGATGTC GACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAAGTCAAAC GAGATGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGAAGTTGCTGAAGAAAGTTGTG GACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAGCAGCGCTAACTCAAGAGAGT GGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGAGATGTTC CTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCATCCTTGAA GAAACGATTGCCTACCTCAAAGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGC GAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAAGGCGCTGTGAGATCACCGGG AAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCAC CACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAG GAGTTGGTGATGACACGAGTGTTCGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCC GTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGATACAAGCTAAGTTTGCTTGT TCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAG

Peptide Sequence

PEP ID	Os04t0557200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27881155:27890773:-1 gene:Os04g0557200 transcript:Os04t0557200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 015, GLABRA3B, GLABRA 3B description:Similar to Anthocyanin regulatory B protein (Fragment). (Os04t0557200-01)
Sequence	MASAPPVQEEPLQPGTNHFRSLLAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVK TRKISNSADLTAGQLVVQRSEQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVV CMTYSFQPGQGLPGKSYASNASVWLRNAQSADSKTFLRSLLAKSASIQTIICIPFTSGVL ELGTTDPVLEDPKLVNRIVAYFQELQFPICLEVLMSTSPSPNETEDADIVSEGLITHNAI EEGQMVVSDECVSNANRDPITMEIDELYSIYEDLDLDMDLDLDTVRFLEDNGWPVNPSSF QLVPASSTEAVAAAAAANDVDGVANSQVSCFMAWKSAKSNEMAVPVVTGIESQKLLKKVV DCGARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILE ETIAYLKVLEKRVKELESSSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHH HVNVTVTDKVVLLEVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLKIQAKFAC SGSVAPGMISEALQKAIGG

Transcript Sequence

Transcript ID	Os04t0557200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27881155:27890773:-1 gene:Os04g0557200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 015, GLABRA3B, GLABRA 3B description:Similar to Anthocyanin regulatory B protein (Fragment). (Os04t0557200-01)
Sequence	GGGTTGCAGAAGAGTGAACTTGGATAGTTGGCAGCTAGAGCAGCCAGCTAGCTAGCTGGA GTCCTTCTTGCATTGGTGGGCAGACTGGAAAGAGAAATTAAACAGCTAGATAGGTTTCTA GACTTGTGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGAC GAACCACTTCAGGAGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGAT CTTTTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAA CGGCGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGT CGTGCAGAGAAGCGAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGA CCACCGGGCGAGGAGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATG GTACTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAG CTATGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATT TCTACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCAC GAGTGGCGTGCTTGAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAA CCGAATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAG CACTAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCAC TCACAACGCCATCGAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAA CCGCGATCCAATCACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCT GGACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAA CCCCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGC GGCTAATGATGTCGACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAG CGCGAAGTCAAACGAGATGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGAAGTTGCT GAAGAAAGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAGCAGCGCT AACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCT CAATGAGATGTTCCTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGC ATCCATCCTTGAAGAAACGATTGCCTACCTCAAAGTGTTGGAGAAAAGGGTGAAAGAGTT GGAGTCCAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAAGGCGCTG TGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGG GAGAGAACACCACCACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCA GTGCCGATGGAAGGAGTTGGTGATGACACGAGTGTTCGACGCGATCAAGAGCCTCTGTCT TGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGATACAAGC TAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGC TATCGGTGGCTAGCGTCGAGAGCGGCACACGTACGTTAGATGAATTTGAAATGCAAGAAG CAGAAGCAGAAGTGCAGAACTACAATACGATCCTCGTGAAATTTTATTTATTATATGCTC GCTGGTCCAGAAAAATATTTGTTTCGGAAGATAGCTTCAATCACATCCTCATGTTCATGC