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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0556300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:27838701:27840702:1 gene:Os04g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 1 description:Glutathione peroxidase. (Os04t0556300-01);Similar to Glutathione peroxidase. (Os04t0556300-02)
Sequence

ATGGCCGCCGCGCCGTCCGCCACCTCCGTCCACGACTTCACCGTCAAGGATGCAAGCGGA
AAAGACGTGAACCTGAGCACCTACAAGGGGAAGGTTCTCCTCATCGTTAACGTCGCATCC
CAATGTGGCTTAACTAACTCCAACTACACTGAGCTGAGCCAGCTGTATGAGAAGTACAAG
GTCCAAGGCTTTGAGATATTGGCTTTCCCGTGCAATCAGTTTGGAGGGCAGGAACCCGGC
TCCAATGAGGAGATTGTCCAGTTTGCTTGCACTCGCTTCAAGGCTGAGTATCCCATTTTT
GACAAGGTTGATGTCAACGGTAACAATGCTGCACCCCTGTACAAGTATCTGAAGTCTAAC
AAAGGTGGGCTTTTCGGTGATAGCATCAAGTGGAACTTCTCCAAATTCTTGGTTGACAAG
GAGGGTCGCGTGGTGGATCGCTATGCGCCCACCACCTCCCCTCTTAGTATTGAGAAGGAT
ATCAAGAAGCTGCTTGGGAGCTCTTAA

Peptide Sequence

PEP ID

Os04t0556300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:27838701:27840702:1 gene:Os04g0556300 transcript:Os04t0556300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 1 description:Glutathione peroxidase. (Os04t0556300-01);Similar to Glutathione peroxidase. (Os04t0556300-02)
Sequence

MAAAPSATSVHDFTVKDASGKDVNLSTYKGKVLLIVNVASQCGLTNSNYTELSQLYEKYK
VQGFEILAFPCNQFGGQEPGSNEEIVQFACTRFKAEYPIFDKVDVNGNNAAPLYKYLKSN
KGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKKLLGSS

Transcript Sequence

Transcript ID

Os04t0556300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27838701:27840702:1 gene:Os04g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 1 description:Glutathione peroxidase. (Os04t0556300-01);Similar to Glutathione peroxidase. (Os04t0556300-02)
Sequence

ACGTCTCGTCTCTGTCTCTCGGCCCACCGCTTCCATCGTTCGTCCTCGTCTCCACGCTAC
CGTTTCGCAACCACCCGCTTCCTCCTCCGGAGACCGCTCGGCCGCCGCTCGCTCCAGCAT
GGCCGCCGCGCCGTCCGCCACCTCCGTCCACGACTTCACCGTCAAGGATGCAAGCGGAAA
AGACGTGAACCTGAGCACCTACAAGGGGAAGGTTCTCCTCATCGTTAACGTCGCATCCCA
ATGTGGCTTAACTAACTCCAACTACACTGAGCTGAGCCAGCTGTATGAGAAGTACAAGGT
CCAAGGCTTTGAGATATTGGCTTTCCCGTGCAATCAGTTTGGAGGGCAGGAACCCGGCTC
CAATGAGGAGATTGTCCAGTTTGCTTGCACTCGCTTCAAGGCTGAGTATCCCATTTTTGA
CAAGGTTGATGTCAACGGTAACAATGCTGCACCCCTGTACAAGTATCTGAAGTCTAACAA
AGGTGGGCTTTTCGGTGATAGCATCAAGTGGAACTTCTCCAAATTCTTGGTTGACAAGGA
GGGTCGCGTGGTGGATCGCTATGCGCCCACCACCTCCCCTCTTAGTATTGAGAAGGATAT
CAAGAAGCTGCTTGGGAGCTCTTAAACCTAAAGGTCGGGATCTGTAGAGCAACCTGCACT
TATGCACTGTATTCAGCACTGAGAGTTGTATTAATAAATTGGTGACATGTACTTCACAGG
TTGCATTTGCACTATACTCCTTGCATCCTGAATCTTTATTGTACTCTGTACCTGTATAGT
TTTCATGTCAATAAATTTCCTTGCTGT