Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0556000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:27833064:27835533:1 gene:Os04g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 5 description:Heavy metal P-type ATPase, Xylem loading of copper (Os04t0556000-01);Similar to heavy metal ATPase. (Os04t0556000-02)
Sequence	GAAACTAGTTCAATGCTCATATCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCA AAAGGGAAGACCTCTGAGGCTATTGCCAAGCTTATGGATCTTGCACCAGAAACTGCAACT ATGTTGATATATGATCATGAAGGGAATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTG ATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTT GTTATATGGGGACAGAGCCATGTGAATGAAAGCATGATCACCGGAGAATCACGACCTGTG GCAAAGAGGAAGGGTGACACTGTCATAGGAGGGACGGTGAATGAGAATGGTGTGCTTCAT GTCCGTGCAACATTTGTTGGATCAGAGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAG TCAGCGCAAATGGCAAAAGCTCCTGTACAAAAGTTTGCTGATCAGATATCTAGAGTCTTT GTTCCCCTGGTCATCATTCTTTCTTTGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGG CTTCATGGTTACCCTAACTCATGGATACCATCTTCCATGGATAGCTTTCAACTAGCTCTC CAATTCGGGATATCAGTTATGGTTATTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCA ACAGCTGTGATGGTTGCTACTGGAGTTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGG CAAGCTCTGGAGAGTGCACAGAAGGTCGACTGCATCGTTTTCGACAAGACAGGGACACTA ACCATTGGGAAGCCTGTTGTGGTCAACACAAGACTGTTAAAAAACATGGTCTTGCGTGAA TTCTATGCTTACGTTGCAGCAGCAGAGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTC GTGGAGCATGCCAAGAAGTTCCATTCGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGAT TTCATTTCAGTGACAGGGCACGGTGTCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTG GGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGGAAGCTTTGGAAATC CTAACGGAAGAAGAGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAGTC GTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGTAT CTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCAAT GCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAA GCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGA ATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACT GACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATC ACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCG CTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGG TTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTC TGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGA

Peptide Sequence

PEP ID	Os04t0556000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:27833064:27835533:1 gene:Os04g0556000 transcript:Os04t0556000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 5 description:Heavy metal P-type ATPase, Xylem loading of copper (Os04t0556000-01);Similar to heavy metal ATPase. (Os04t0556000-02)
Sequence	ETSSMLISFILLGKYLEILAKGKTSEAIAKLMDLAPETATMLIYDHEGNVVGEKEIDSRL IQKNDVIKVVPGGKVASDGFVIWGQSHVNESMITGESRPVAKRKGDTVIGGTVNENGVLH VRATFVGSESALAQIVRLVESAQMAKAPVQKFADQISRVFVPLVIILSLLTWLAWFLAGR LHGYPNSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVATGVGASQGVLIKGG QALESAQKVDCIVFDKTGTLTIGKPVVVNTRLLKNMVLREFYAYVAAAEVNSEHPLGKAV VEHAKKFHSEESHVWTEARDFISVTGHGVKAKISGRAVMVGNKSFMLTSGIDIPVEALEI LTEEEEKAQTAIIVAMDQEVVGIISVSDPIKPNAREVISYLKSMKVESIMVTGDNWGTAN AISKEVGIENTVAEAKPEQKAEKVKELQSAGRTVAMVGDGINDSPALVSADVGLAIGAGT DVAIEAADIVLMKSNLEDVITAIDLSRKTFFRIRMNYVWALGYNIIGIPIAAGVLFPSTR FRLPPWVAGAAMAASSVSVVCWSLLLRYYKSPKLGR

Transcript Sequence

Transcript ID	Os04t0556000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27833064:27835533:1 gene:Os04g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 5 description:Heavy metal P-type ATPase, Xylem loading of copper (Os04t0556000-01);Similar to heavy metal ATPase. (Os04t0556000-02)
Sequence	TTGAAACTAGTTCAATGCTCATATCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGG CAAAAGGGAAGACCTCTGAGGCTATTGCCAAGCTTATGGATCTTGCACCAGAAACTGCAA CTATGTTGATATATGATCATGAAGGGAATGTTGTGGGCGAGAAGGAAATTGACAGTAGGT TGATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCT TTGTTATATGGGGACAGAGCCATGTGAATGAAAGCATGATCACCGGAGAATCACGACCTG TGGCAAAGAGGAAGGGTGACACTGTCATAGGAGGGACGGTGAATGAGAATGGTGTGCTTC ATGTCCGTGCAACATTTGTTGGATCAGAGAGTGCCCTTGCACAGATTGTACGGCTAGTAG AGTCAGCGCAAATGGCAAAAGCTCCTGTACAAAAGTTTGCTGATCAGATATCTAGAGTCT TTGTTCCCCTGGTCATCATTCTTTCTTTGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGA GGCTTCATGGTTACCCTAACTCATGGATACCATCTTCCATGGATAGCTTTCAACTAGCTC TCCAATTCGGGATATCAGTTATGGTTATTGCATGCCCTTGCGCCTTAGGGCTTGCAACTC CAACAGCTGTGATGGTTGCTACTGGAGTTGGTGCCTCACAAGGAGTTCTTATCAAGGGTG GGCAAGCTCTGGAGAGTGCACAGAAGGTCGACTGCATCGTTTTCGACAAGACAGGGACAC TAACCATTGGGAAGCCTGTTGTGGTCAACACAAGACTGTTAAAAAACATGGTCTTGCGTG AATTCTATGCTTACGTTGCAGCAGCAGAGGTCAACAGTGAGCACCCACTGGGTAAGGCAG TCGTGGAGCATGCCAAGAAGTTCCATTCGGAAGAGAGCCATGTCTGGACTGAAGCAAGGG ATTTCATTTCAGTGACAGGGCACGGTGTCAAGGCAAAAATAAGTGGCAGGGCTGTTATGG TGGGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGGAAGCTTTGGAAA TCCTAACGGAAGAAGAGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAG TCGTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGT ATCTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCA ATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGA AAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATG GAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCA CTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGA TCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGG CGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCC GGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCG TCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCA GTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTA ATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTA CCTACGTATATATGCACCGTGTGTTTACAAGTGTTAAATATGGAGCACTTTGCCAACACT AGCAGGTGATACGTTGTAGTGC