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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0554500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:27740064:27740809:1 gene:Os04g0554500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 6 description:Similar to RCc3 protein. (Os04t0554500-00)
Sequence

ATGGCAGGCAAGGCCTCGATCGCGCTGTTCCTCGCCGTCAACCTGGTGGTGTTCTCGTTG
GCCAGCGCCTGCGGCGGCCGCTGCCCGACGCCGACGCCGTCGACCCCATCGACGCCCACC
CCGACGCCGGCGGCGTTCGGTAAGTGCCCACGCGACGCGCTGAAGCTGGGCGTGTGCGCC
AACGTGCTGGGCCTCATCAAGGCCAAGGTGGGCGTGCCGCCGGCGGAGCCGTGCTGCCCG
CTGCTGGAGGGGCTCGTCGACCTCGAGGCGGCGGTATGCCTCTGCACGGCCATCAGAGGC
AACATCCTCGGCATCAACCTCAACCTCCCCGTCGACCTCAGCCTCATCCTCAACTACTGC
GGCAAGCGCGTGCCCACCGGCTTCAAATGCTAA

Peptide Sequence

PEP ID

Os04t0554500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:27740064:27740809:1 gene:Os04g0554500 transcript:Os04t0554500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 6 description:Similar to RCc3 protein. (Os04t0554500-00)
Sequence

MAGKASIALFLAVNLVVFSLASACGGRCPTPTPSTPSTPTPTPAAFGKCPRDALKLGVCA
NVLGLIKAKVGVPPAEPCCPLLEGLVDLEAAVCLCTAIRGNILGINLNLPVDLSLILNYC
GKRVPTGFKC

Transcript Sequence

Transcript ID

Os04t0554500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27740064:27740809:1 gene:Os04g0554500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 6 description:Similar to RCc3 protein. (Os04t0554500-00)
Sequence

CTAGTAATCAGGAGCTCCTGAAACTCCAGAGAGCTAATCGCTCGTCAGCTTAGTGCGCGT
GATCCAGCGGCAGCAATGGCAGGCAAGGCCTCGATCGCGCTGTTCCTCGCCGTCAACCTG
GTGGTGTTCTCGTTGGCCAGCGCCTGCGGCGGCCGCTGCCCGACGCCGACGCCGTCGACC
CCATCGACGCCCACCCCGACGCCGGCGGCGTTCGGTAAGTGCCCACGCGACGCGCTGAAG
CTGGGCGTGTGCGCCAACGTGCTGGGCCTCATCAAGGCCAAGGTGGGCGTGCCGCCGGCG
GAGCCGTGCTGCCCGCTGCTGGAGGGGCTCGTCGACCTCGAGGCGGCGGTATGCCTCTGC
ACGGCCATCAGAGGCAACATCCTCGGCATCAACCTCAACCTCCCCGTCGACCTCAGCCTC
ATCCTCAACTACTGCGGCAAGCGCGTGCCCACCGGCTTCAAATGCTAAGCATCGATAGGC
GGCGGCGCTACTGCGCATTTGTTCCGCTGGCTATTTTATCTGGACTGTTTGATTGCTACT
ACGTGCTAGCTTAGCTTGCAACATTTGCGCGCATGCATGGATCGATCGACAAATATGCAT
GCGTGCACCTGCAAATTAAGCATGCACACGTACCATGGAGCTACTCGATTTTCCGTGTTT
TTATTCGTTTCATGTGTGGGTCCTTGTATGATCTGTTGATTATTTCTTTTGCATTATGAA
TAAAATAAATTTCACACTTTGTTTGG