Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0554200-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:27732827:27735793:1 gene:Os04g0554200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os04t0554200-01);PapD-like domain containing protein. (Os04t0554200-02)
Sequence	ATGAGTAATACGCTGCTTCGTGTGCACCCTTCCGAGCTCAAGATCCCCTATGAGTACAAG AGGAAGAGGTCTTGCTGCATGCAGCTGACGAACAAGACCAACCAGTACGTGGCGTTCAAG GTGAAAACGACGAACCCAAGGAAGTACTCTGTGCGGCACGCCTGCGGTATACTGCCGCCC CGGAGCTCGTGCGATATCACAGTTACAATGCAGGCTCCCGTTGAAATGCTATCCGATTAC CACTGCAAGGACAAGTTCCTCGTGCAGAGCGTGGCGGTTGGATATGGGGCGACCATGAGA GACTTTGTCCCTGAATTGTTTACTAAAGCGCCAGGCAGGGTGATCGAGGAGTTCAAGCTG CGGGTGGTGTATGTTGCTGCTAATCCTCCCTCTCCAGTGCCTGAGGAGGAAGAGGAAGAG GAAGAGGATGCATCCCCTCAGTCAGAGGTCATGAGCCATGGAGTGAAAATGACATCAGTG TTTGATGCTGTAACTGTATCCACACTCACCGATAGGTCAGCAGACAAAGTTTCATCTGCT GAGGGTGTCTCTGTAGAATCAATGCTGGTTGCAGAGAGAGAATATCCAGTAGAAGAAAAT CAGAAGCTTCAGCAACAGATGGAACTACTTAGGGCAGCAAGATCATCTCAACAGGGCTTC TCAGCAATGTTTGTGCTGCTAGTTTTCATGTCATCTGTCTGCATTGGGCACTTCATGAAG CAGATCAAGGTTTAG

Peptide Sequence

PEP ID	Os04t0554200-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:27732827:27735793:1 gene:Os04g0554200 transcript:Os04t0554200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os04t0554200-01);PapD-like domain containing protein. (Os04t0554200-02)
Sequence	MSNTLLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPP RSSCDITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKL RVVYVAANPPSPVPEEEEEEEEDASPQSEVMSHGVKMTSVFDAVTVSTLTDRSADKVSSA EGVSVESMLVAEREYPVEENQKLQQQMELLRAARSSQQGFSAMFVLLVFMSSVCIGHFMK QIKV

Transcript Sequence

Transcript ID	Os04t0554200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27732827:27735793:1 gene:Os04g0554200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os04t0554200-01);PapD-like domain containing protein. (Os04t0554200-02)
Sequence	GCTCCTCCTTTCTCGCTCTCGCTCTGTCCGATCGGAGCCATGAGTAATACGCTGCTTCGT GTGCACCCTTCCGAGCTCAAGATCCCCTATGAGTACAAGAGGAAGAGGTCTTGCTGCATG CAGCTGACGAACAAGACCAACCAGTACGTGGCGTTCAAGGTGAAAACGACGAACCCAAGG AAGTACTCTGTGCGGCACGCCTGCGGTATACTGCCGCCCCGGAGCTCGTGCGATATCACA GTTACAATGCAGGCTCCCGTTGAAATGCTATCCGATTACCACTGCAAGGACAAGTTCCTC GTGCAGAGCGTGGCGGTTGGATATGGGGCGACCATGAGAGACTTTGTCCCTGAATTGTTT ACTAAAGCGCCAGGCAGGGTGATCGAGGAGTTCAAGCTGCGGGTGGTGTATGTTGCTGCT AATCCTCCCTCTCCAGTGCCTGAGGAGGAAGAGGAAGAGGAAGAGGATGCATCCCCTCAG TCAGAGGTCATGAGCCATGGAGTGAAAATGACATCAGTGTTTGATGCTGTAACTGTATCC ACACTCACCGATAGGTCAGCAGACAAAGTTTCATCTGCTGAGGGTGTCTCTGTAGAATCA ATGCTGGTTGCAGAGAGAGAATATCCAGTAGAAGAAAATCAGAAGCTTCAGCAACAGATG GAACTACTTAGGGCAGCAAGATCATCTCAACAGGGCTTCTCAGCAATGTTTGTGCTGCTA GTTTTCATGTCATCTGTCTGCATTGGGCACTTCATGAAGCAGATCAAGGTTTAGTCATAT GTTTACGCAAAAAGGATCTCTGTTTATTTCCACCAAGCTAACGCACCATCTCCGCTATCT ATAATACTGTCACAGGCAATAGAGTAGTAGTGTACGCATAGAAAATATTCAATAGGTTGT ACATTTTCAGATAGAAGACGAGCTATTTGCATTTTATTCATGTAAATTGTATAGCATAAT TGAAGTACTTGTGATCTGTAATGCCGTGATAGATAGAGAAAACAAAGTTTTACT