Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0552300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:27661549:27662832:1 gene:Os04g0552300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-U2-1 description:Cyclin-related 2 domain containing protein. (Os04t0552300-01)
Sequence

ATGGCGTCCACTGAGTTAGCGTCGGATGTGTACGCGCTCCCGTGCGGCGACGACGGCACG
ACGGCGCTGTCGACGCCGGTGGTCGTGTCGGTCCTCGCGTCGCTGCTGGAGCGGCACATC
GCCCGGAACGAGAGGGACCAGGCGGCGGCGGCGGACGGCGAGGCCGCGAGGAGGGCGCGC
GCCTTCGACAGCGGCACGGTGCTGGACATGAGCCTTCACGCGTTCCTGGAGCGGTTCTCC
CGGTACGCGAACGTCTCGCCGCAGGTGTACGTCGTGGCGTACGCGTACCTGGACCGGCTT
CGCCGCGGCGACGGCGTGCGCGTCGTGTCGGCCAACGCCCAGCGGCTGCTCACCACAGCC
ATCCTCGTCGCCTCCAAGTTCGTCGAGGACCGGAACTACAAGAACTCGTACTTCGCCGCG
GTGGGCGGGCTGACCGCCGCGGAACTGAGCTCGCTGGAGCTGGACTTCCTCTTCCTGATG
CAGTTCAGGCTCAACGTGAGCGTCAGCGTGTTCCAGAGCTACTGCCGGCACCTGGAGAGG
GAGGTGAGCTACGGCGGCGGGTACCAGGTGGAGAGGTGCCTCAAGAAGGCCCTCGTCTGC
TCCGGCGAGGCGCAGGCGCAGCAGAGGCAAGCGGCGTCGGCGGCAGCCCAGTAG

Peptide Sequence

PEP ID

Os04t0552300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:27661549:27662832:1 gene:Os04g0552300 transcript:Os04t0552300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-U2-1 description:Cyclin-related 2 domain containing protein. (Os04t0552300-01)
Sequence

MASTELASDVYALPCGDDGTTALSTPVVVSVLASLLERHIARNERDQAAAADGEAARRAR
AFDSGTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDRLRRGDGVRVVSANAQRLLTTA
ILVASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLER
EVSYGGGYQVERCLKKALVCSGEAQAQQRQAASAAAQ

Transcript Sequence

Transcript ID

Os04t0552300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27661549:27662832:1 gene:Os04g0552300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-U2-1 description:Cyclin-related 2 domain containing protein. (Os04t0552300-01)
Sequence

AACCGCAGTAGTGCAGTACCAGCCATCAATCAGATCTGCCCCTGGATGCATTTGTCGTCC
GCTTGATCATAAATAAGCTCGGGTGATCGGGTCAGGGGCCTCAATGGAAGGTGCCTGAAG
GCTTCATCTCCGTGTCTCGATTTGTTTTAGCTCCAGTTTGCGTGTACGTGCTGAGTTTTT
TTATGCCGATATCTTTTGTTTCTTTGCTCCTTCCTCGTGTCGCCTTCAGCTGTTCAGTTC
CGCCATTGTTAATAGCTTCTTTTTGCCCCCACGCTTGCCTCCCTCTGGTGTATAAAGTGT
CTGCATTTGCAAGAGTTCTCTGTGTACTTGTGTAGCATAGGTTTTGTGAAGAACCAAGCT
TTTGCCATTGAATTCTTCAGGAGATGGCGTCCACTGAGTTAGCGTCGGATGTGTACGCGC
TCCCGTGCGGCGACGACGGCACGACGGCGCTGTCGACGCCGGTGGTCGTGTCGGTCCTCG
CGTCGCTGCTGGAGCGGCACATCGCCCGGAACGAGAGGGACCAGGCGGCGGCGGCGGACG
GCGAGGCCGCGAGGAGGGCGCGCGCCTTCGACAGCGGCACGGTGCTGGACATGAGCCTTC
ACGCGTTCCTGGAGCGGTTCTCCCGGTACGCGAACGTCTCGCCGCAGGTGTACGTCGTGG
CGTACGCGTACCTGGACCGGCTTCGCCGCGGCGACGGCGTGCGCGTCGTGTCGGCCAACG
CCCAGCGGCTGCTCACCACAGCCATCCTCGTCGCCTCCAAGTTCGTCGAGGACCGGAACT
ACAAGAACTCGTACTTCGCCGCGGTGGGCGGGCTGACCGCCGCGGAACTGAGCTCGCTGG
AGCTGGACTTCCTCTTCCTGATGCAGTTCAGGCTCAACGTGAGCGTCAGCGTGTTCCAGA
GCTACTGCCGGCACCTGGAGAGGGAGGTGAGCTACGGCGGCGGGTACCAGGTGGAGAGGT
GCCTCAAGAAGGCCCTCGTCTGCTCCGGCGAGGCGCAGGCGCAGCAGAGGCAAGCGGCGT
CGGCGGCAGCCCAGTAGACGTCAGCTCCGGAGCCGCCATTCGCGCGTGATCTGCCAGTTG
CCCGCCACAGGCGGCCGGCACAGCAGCCGCACGATTTGATCGCCGGCAGCTGCCACTCGA
GTGCCCAGAAAGATCAAGGATGTAAATAGTTATGGTTTGCTCGTGTACTTAGGATAGGAG
TAAGAATTGTGCAATGCAATTGTTCCTCTCTACCTCGATTGGTAAAAGAACTGATGCGGG
GACAAGTAAAATTGATTTTCTTTC