Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0552000-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:27645701:27647185:1 gene:Os04g0552000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXPB15 description:Barwin-related endoglucanase domain containing protein. (Os04t0552000-00)
Sequence	ATGGCTTCCAGGTTCCAGCTGATTTTGTCGACCTTCGTTGTCATTGCCGCTGTCACCATG CTTCCACGCCCTTGCGCTTCCATCGAGTTCCACCGCAAGCTCTCCAGCTGGTCCAATGGC GGAGCTACGTGGTATGGCGCTGCAAATGGCGCCGGAAGTGATGGTGGTGCATGTGGGTAC CAGGGTGCCGTCTTCCAGGCACCGTTCTCGTCTATGATCGCCGCCGGCAGTCCTTCCATC TACAAGTCTGGCTTGGGCTGCGGCTCTTGCTACCAGGTGAAATGCACTGGAAATAGCGCT TGCTCGGGCAACCCGGTGACTGTCGTCCTCACCGACGAGTGCCCCGGAGGCCCGTGCCTC AGCGAGCCGGTCCACTTCGACCTGAGCGGCACGGCGTTCGGTGCCATGGCGAACCCCGGC CAGGCCGACCAGCTGCGCGCGGCCGGCGTCCTCCAAATCCAGTACAACCGCGTGCCGTGC AACTGGGGCGGAGTGAAGCTCACCTTCGTCGTGGACGTCGGCTCGAACCCCAACTACTTC GCCGTGCTCGTCAAGTACGAGAACGGAGACGGTGACCTCTCCGGCGTGGAGCTCATGCAG ACCGGCGCCGGCGCCGCCTGGACGCAGATGCAGCAGTCGTGGGGCGCCGTCTGGAAGCTG AACGCCGGCTCGGCACTGCAGGCGCCGTTCTCCATCCGCCTCACGTCCAGCTCCGGCAAG ACGCTCGTCGCCAGCAACGTCATCCCTTCCGGGTGGAAGCCCGGCATGTCGTACATATCG ACGGTGAACTTCTAA

Peptide Sequence

PEP ID	Os04t0552000-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:27645701:27647185:1 gene:Os04g0552000 transcript:Os04t0552000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXPB15 description:Barwin-related endoglucanase domain containing protein. (Os04t0552000-00)
Sequence	MASRFQLILSTFVVIAAVTMLPRPCASIEFHRKLSSWSNGGATWYGAANGAGSDGGACGY QGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCL SEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSNPNYF AVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGK TLVASNVIPSGWKPGMSYISTVNF

Transcript Sequence

Transcript ID	Os04t0552000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27645701:27647185:1 gene:Os04g0552000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXPB15 description:Barwin-related endoglucanase domain containing protein. (Os04t0552000-00)
Sequence	ATGGCTTCCAGGTTCCAGCTGATTTTGTCGACCTTCGTTGTCATTGCCGCTGTCACCATG CTTCCACGCCCTTGCGCTTCCATCGAGTTCCACCGCAAGCTCTCCAGCTGGTCCAATGGC GGAGCTACGTGGTATGGCGCTGCAAATGGCGCCGGAAGTGATGGTGGTGCATGTGGGTAC CAGGGTGCCGTCTTCCAGGCACCGTTCTCGTCTATGATCGCCGCCGGCAGTCCTTCCATC TACAAGTCTGGCTTGGGCTGCGGCTCTTGCTACCAGGTGAAATGCACTGGAAATAGCGCT TGCTCGGGCAACCCGGTGACTGTCGTCCTCACCGACGAGTGCCCCGGAGGCCCGTGCCTC AGCGAGCCGGTCCACTTCGACCTGAGCGGCACGGCGTTCGGTGCCATGGCGAACCCCGGC CAGGCCGACCAGCTGCGCGCGGCCGGCGTCCTCCAAATCCAGTACAACCGCGTGCCGTGC AACTGGGGCGGAGTGAAGCTCACCTTCGTCGTGGACGTCGGCTCGAACCCCAACTACTTC GCCGTGCTCGTCAAGTACGAGAACGGAGACGGTGACCTCTCCGGCGTGGAGCTCATGCAG ACCGGCGCCGGCGCCGCCTGGACGCAGATGCAGCAGTCGTGGGGCGCCGTCTGGAAGCTG AACGCCGGCTCGGCACTGCAGGCGCCGTTCTCCATCCGCCTCACGTCCAGCTCCGGCAAG ACGCTCGTCGCCAGCAACGTCATCCCTTCCGGGTGGAAGCCCGGCATGTCGTACATATCG ACGGTGAACTTCTAA