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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0551600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:27627478:27628262:-1 gene:Os04g0551600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os04t0551600-01)
Sequence

ATGGCTGGCGCCGGCACCGTCTGCTCCATGTGCGGCGACGTCGGCTTCCCCGACAAGCTC
TTCCAGTGCGCGCGCTGCCGCTACCGCTTCCAGCACTCATACTGCACGAACTACTACGGT
GACGCGGCGCCCGCCCCGGCCGGCGCCGACATGTGCGACTGGTGCCTGAGCGACGTCGCC
GGGAAGGCGAGGTACTCGTCGGCGGCCGGGAAGCAGCAGGGCGCCGGAAGCCAGGAGTCA
TCCACGACGACGTCGAGCTCCTCCGCCGGAAGGGGTGGCGGCGGCAAGCCCGGCGCCGGC
GAGCAGGAGAGCGGGCGGCGGGGGACCAAGGCGGCCGGCCGAAGGTACAAGCTGCTCAAG
GACGTCTTGTGTTAG

Peptide Sequence

PEP ID

Os04t0551600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:27627478:27628262:-1 gene:Os04g0551600 transcript:Os04t0551600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os04t0551600-01)
Sequence

MAGAGTVCSMCGDVGFPDKLFQCARCRYRFQHSYCTNYYGDAAPAPAGADMCDWCLSDVA
GKARYSSAAGKQQGAGSQESSTTTSSSSAGRGGGGKPGAGEQESGRRGTKAAGRRYKLLK
DVLC

Transcript Sequence

Transcript ID

Os04t0551600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27627478:27628262:-1 gene:Os04g0551600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os04t0551600-01)
Sequence

TTCCATCTCCTCCATTCCCATCCGCCCGCATCTCCACTCCTCCTCTCCCCACCTCCTCAT
CAAGCTAGCTAAGCTAGCTCTCCCAACCATGGCTGGCGCCGGCACCGTCTGCTCCATGTG
CGGCGACGTCGGCTTCCCCGACAAGCTCTTCCAGTGCGCGCGCTGCCGCTACCGCTTCCA
GCACTCATACTGCACGAACTACTACGGTGACGCGGCGCCCGCCCCGGCCGGCGCCGACAT
GTGCGACTGGTGCCTGAGCGACGTCGCCGGGAAGGCGAGGTACTCGTCGGCGGCCGGGAA
GCAGCAGGGCGCCGGAAGCCAGGAGTCATCCACGACGACGTCGAGCTCCTCCGCCGGAAG
GGGTGGCGGCGGCAAGCCCGGCGCCGGCGAGCAGGAGAGCGGGCGGCGGGGGACCAAGGC
GGCCGGCCGAAGGTACAAGCTGCTCAAGGACGTCTTGTGTTAGTTTGTTTGTTTAGGTCA
CCCATGCCGTCACCCAGTACTAGTCGTCATCGCTTAGGCTATATAGACTCGTTAGCTAGC
CGCTAGTTTGATGATCGATGTGCATATACTACGTGCGTACTCCATATTGTATCTAGTTGT
GTGTGTTAGGGTCTTTTAAGGGGGCCTGTTACCTG